Query= MSMg01no151_e17.b1 MSMg01no151_e17.b1 CHROMAT_FILE:
MSMg01no151_e17.b1 PHD_FILE: MSMg01no151_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:04 2005
(194 letters)
>mm_chr5_123191963_123192556
Length = 594
Score = 310 bits (160), Expect = 5e-89
Identities = 184/192 (95%)
Strand = Plus / Plus
Query: 1 cacctcgaccagtgtgcagttctcgtcctccgacggcaatggctcggccccgtgcctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacctcgaccagtgtgcagttctcgtcctccgacggcaatggctcggccccgtgcctcgt 260
Query: 61 gacccaagggtgcagcttcaacgaatgacaggaggggtaagggacaggtgctgccggtca 120
|||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||
Sbjct: 261 aacccaagggtgcagcttcaacgaatgacaggaagggtaagggacaggtgccgctggtca 320
Query: 121 cccgcaaggccctgccagcgagcagagtcagggagggcatgtaggagggagaggccaggg 180
||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 321 cccgcaaggtcctgccagtgagcagagccagggagggcatgcaggagggagaggccaggg 380
Query: 181 cctggggtctgg 192
||||||||||||
Sbjct: 381 cctggggtctgg 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_e17.g1 MSMg01no151_e17.g1 CHROMAT_FILE:
MSMg01no151_e17.g1 PHD_FILE: MSMg01no151_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:04 2005
(242 letters)
>mm_chr5_123293708_123294349
Length = 642
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1 aagagaggggtatgtgaccttttaccttgatgggttagctctattgctagcaatctgact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 442 aagagaggggtatgtgaccttttaccttgatgggtaagctctattgctagcaatctgact 383
Query: 61 gattcttcaattggctctggagacttcccgt-ggggtggcttactcattctagctactta 119
||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 382 gattcttcaattggctctggagacttccc-tagcggtggcttactcattctagctactta 324
Query: 120 ttcttgcttcagcctagatgacaaggtgtcctcagactggctgtccgcagctgtggttgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttcttgcttcagcctagatgacaaggtgtcctcagactggctgtccgcagctgtggttgg 264
Query: 180 ctgaccacaggttcctggatctaggttctcatttctggtaaacagaaacttaggcctaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ctgaccacaggttcctggatctaggttctcatttctggtaaacagaaacttaggcctaag 204
Query: 240 cca 242
|||
Sbjct: 203 cca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
