Query= MSMg01no154_b07.b1 MSMg01no154_b07.b1 CHROMAT_FILE:
MSMg01no154_b07.b1 PHD_FILE: MSMg01no154_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:37 2005
(629 letters)
>mm_chr5_93140701_93141729
Length = 1029
Score = 1189 bits (615), Expect = 0.0
Identities = 624/629 (99%), Gaps = 4/629 (0%)
Strand = Plus / Plus
Query: 1 tttgctactgcacttggaacagagacagtattcactccgggctggaactatagactggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgctactgcacttggaacagagacagtattcactccgggctggaactatagactggaa 260
Query: 61 acagaggttccctgttttcattagtcaactctcaaaggatggatggagctagcggcagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaggttccctgttttcattagtcaactctcaaaggatggatggagctagcggcagat 320
Query: 121 tattctagggctcatgctcccttagttccttaccacccctctttcctggccacgttgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattctagggctcatgctcccttagttccttaccacccctctttcctggccacgttgctt 380
Query: 181 tccatcagcactacttattgaactaagaacactgctgattcaggccaagtatttttatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccatcagcactacttattgaactaagaacactgctgattcaggccaagtatttttatag 440
Query: 241 tctctgggtgaaaagaatgtggaatacatgtgttgtcttggcttttatgacccttgaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctctgggtgaaaagaatgtggaatacatgtgttgtcttggcttttatgacccttgaaac 500
Query: 301 ttgctttgcttctcttgaaaccctaaagaagccacagcccacttctttctgctttagatc 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgcattgcttctcttgaaaccctaaagaagccacagcccacttctttctgctttagatc 560
Query: 361 agcatctaatagtatgctgctagagttgttattcttttaaggttaataaaaacaattgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcatctaatagtatgctgctagagttgttattcttttaaggttaataaaaacaattgct 620
Query: 421 attcatttggaggcaaattactcaacacacacacacacacacacagagggcatcaccaag 480
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 attcatttggaggcaaattactcaacacacacacacacaca----gagggcatcaccaag 676
Query: 481 taggaataaggactgtcagatttttttaactagacaacatgctcgttgtattaacacagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 taggaataaggactgtcagatttttttaactagacaacatgctcgttgtattaacacagg 736
Query: 541 tactaaggttatgaatttatgatgtgaccttcaccttagagttggctccttaggactgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tactaaggttatgaatttatgatgtgaccttcaccttagagttggctccttaggactgat 796
Query: 601 tcactcttggaggtctgatcttgaaggtc 629
|||||||||||||||||||||||||||||
Sbjct: 797 tcactcttggaggtctgatcttgaaggtc 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_b07.g1 MSMg01no154_b07.g1 CHROMAT_FILE:
MSMg01no154_b07.g1 PHD_FILE: MSMg01no154_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:37 2005
(522 letters)
>mm_chr5_93307214_93308135
Length = 922
Score = 605 bits (313), Expect = e-177
Identities = 373/407 (91%), Gaps = 25/407 (6%)
Strand = Plus / Minus
Query: 137 ttacaaatacaaaaaaaaa--ttttttttttagttaaattcctaattttctgagctggtg 194
||||||||||||||||||| || ||||||||| |||||||||||||||||||||||
Sbjct: 922 ttacaaatacaaaaaaaaaag---ttcttttagttatattcctaattttctgagctggtg 866
Query: 195 agctggct-------------------caggtaagtaagccagagtttgatccgcagaac 235
|||||||| |||||||||||||||||||||||||||||||||
Sbjct: 865 agctggctcagtagttaaaagtattaccaggtaagtaagccagagtttgatccgcagaac 806
Query: 236 acatggaggacagagagaactgactccctaaaaattgtcctctgaccctctcaagcatac 295
||||||||||||||||||| ||| ||||||||| ||||| |||||||| ||||||||| |
Sbjct: 805 acatggaggacagagagaattgattccctaaaagttgtcttctgaccc-ctcaagcatgc 747
Query: 296 ccacacacctcagaaacacacacaatactaagaatacattttttttagctcataaatttt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ccacacacctcagaaacacacacaatactaagaatacattttttttagctcataaatttt 687
Query: 356 tgaataagctagtcaatgagaaaagggctattctccgaagttacaccagcactggtaact 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgaataagctagtcaatgagaaaagggctattctccgaagttacaccagcactggtaact 627
Query: 416 acaagaaccccatgtagttcacccacggtgtaaatccgccttacaatccactactgccag 475
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 626 acaagaaccccatgtagttcacccgctgtgtaaatccgccttacaatccactactgccag 567
Query: 476 gaaatggaatccaagcatgctcagtgtatagaggccagataagaaac 522
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaaatggaatccaagcatgctcagtgtatagaggccagataagaaac 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
