Query= MSMg01no156_h20.b1 MSMg01no156_h20.b1 CHROMAT_FILE:
MSMg01no156_h20.b1 PHD_FILE: MSMg01no156_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:38 2005
(316 letters)
>mm_chr5_74240682_74241395
Length = 714
Score = 569 bits (294), Expect = e-166
Identities = 307/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 4 ggaattcattctgtagaccaggttgaccttgaactcagaaatctgcctgcctctgccccc 63
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 616 ggaattcattctgtagaccaggctgaacttgaactcagaaatctgcctgcctctgccccc 557
Query: 64 caagtgctgggattaaaggcgtgtgccaccacaaacttttctaaagaagcgaccagaaag 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 556 caagtgctgggattaaaggcgtgcgccaccacaaacttttctaaagaagcgaccagaaag 497
Query: 124 agatgaaagcttaatgcacctagactatagccccagggagagatttagtcctgagttctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agatgaaagcttaatgcacctagactatagccccagggagagatttagtcctgagttctt 437
Query: 184 ttaacctggtggcgcatcggcatcccccagagggttttgaccatcctaagtgcttcttga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttaacctggtggcgcatcggcatcccccagagggttttgaccatcctaagtgcttcttga 377
Query: 244 gggctaggaccttaaaagttctgagtcagtaggtctggggggacattttcaacacccccc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 376 gggctaggaccttaaaagttctgagtcagtaggtctggggggacattttcaaca--cccc 319
Query: 304 ccccaggaactg 315
||||||||||||
Sbjct: 318 ccccaggaactg 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 714
Length adjustment: 9
Effective length of query: 307
Effective length of database: 705
Effective search space: 216435
Effective search space used: 216435
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_h20.g1 MSMg01no156_h20.g1 CHROMAT_FILE:
MSMg01no156_h20.g1 PHD_FILE: MSMg01no156_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:38 2005
(245 letters)
>mm_chr5_74092741_74093388
Length = 648
Score = 377 bits (195), Expect = e-109
Identities = 230/249 (92%), Gaps = 15/249 (6%)
Strand = Plus / Plus
Query: 1 catttcacagacaccaaggagcctgccacaggaaggctttctgctagccagggtccaggc 60
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 201 catttcacagacaccaaggagcctgccacaggaaggctttctgctcgccagggttcaggc 260
Query: 61 caaatggaaaagagacactttctgc----cttttcccgagtcgtacaggcttggctgatt 116
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 caaatggaaaagagacactttctgcctttcttttcccgagtcgtacaggcttggctgatt 320
Query: 117 tacactgtcaatgttttttttttgtttgttttgttttttttttaaagaatattttccaaa 176
||||||||||||| ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 321 tacactgtcaatg---------tgttt-ttttg-ttttttttaaaagaatattttccaaa 369
Query: 177 gtgtatccatggagaacagatctggtaggatgtcccataagaaaatgcttcatagttaga 236
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 370 gtgtatccatggagaacagatctgataggatgtcccataagaaaatgcttcatagttaga 429
Query: 237 taatgcaga 245
|||||||||
Sbjct: 430 taatgcaga 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 648
Length adjustment: 9
Effective length of query: 236
Effective length of database: 639
Effective search space: 150804
Effective search space used: 150804
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
