Query= MSMg01no161_b14.b1 MSMg01no161_b14.b1 CHROMAT_FILE:
MSMg01no161_b14.b1 PHD_FILE: MSMg01no161_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:20 2005
(423 letters)
>mm_chr5_99540970_99541792
Length = 823
Score = 505 bits (261), Expect = e-147
Identities = 282/289 (97%)
Strand = Plus / Plus
Query: 17 gaattcattgctattaatctagaagcttttgtattggctggtttataactctcaggtctt 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattcattgctattaatctagaagcttttgtattggctggtttataactctcaggtctt 276
Query: 77 ctgttaggttcttgctcttctgctgtcaatactgggcagttactcccccctccccaagac 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ctgttaggttcttgctcttctgctgtcaatactgggcagttactcccccctccccaagac 336
Query: 137 ttttacaccagtaggtcggtaaggggtgtggatatgaaccacttcaaggatggtttcaag 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttttacaccagtaggtcggtaaggggtgtggatatgaaccacttcaaggatggtttcaag 396
Query: 197 gaacagtctgctttattgtgtgtgaacaaacacttatatagtggcagcccacccactgtg 256
|||||||||||||||||| |||||| |||||||||| ||| ||||||||||||| ||||
Sbjct: 397 gaacagtctgctttattgcatgtgaataaacacttatgtagcggcagcccacccattgtg 456
Query: 257 actggttagcacattacccacattaccttgggctagacggtgaattctt 305
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 457 actggttagcacattacccacattaccttgggctagacagtgaattctt 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_b14.g1 MSMg01no161_b14.g1 CHROMAT_FILE:
MSMg01no161_b14.g1 PHD_FILE: MSMg01no161_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:20 2005
(374 letters)
>mm_chr5_99633203_99633976
Length = 774
Score = 528 bits (273), Expect = e-154
Identities = 303/313 (96%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 58 cttcccctggcttgctcagcttgctttcttatacaacccaggactaccagcccagggatg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 cttcccctggcttgctcagcttgctttcttatacaacccaggactaccagcccagggatg 713
Query: 118 gcaccactcacagtgggccctctcctcttgatcacttattgatccttacagctggatcac 177
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 712 gcaccactcacagtgggccctctcc-cttgatcacttattgatccttacagctggatctc 654
Query: 178 atggaggcatttcctcaagggaggctcctttgtctgtgataactccagcttgggtcaagt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 atggaggcatttcctcaagggaggctcctttgtctgtgataactccagcttgggtcaagt 594
Query: 238 ggacacacaaaaccagtcagtaccgagagtgatttctgcctcacagtcaaggtcttcact 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 593 ggacacacaaaaccagtcagtaccgagagtgatttctgcctcacagtcaaggtcatcact 534
Query: 298 gagtaggtcttagccatggagttatatagttaggtttggtacagaactgtgactggagtg 357
|||||||||||||| ||||||||||| || |||||||||| |||||||||||||| |||
Sbjct: 533 gagtaggtcttagctatggagttatagagggaggtttggtatagaactgtgactggggtg 474
Query: 358 gggatggggtgca 370
||||||| |||||
Sbjct: 473 gggatggtgtgca 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
