MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-164C16
Chromosome	5 (Build37)
Map Location	75,316,231 - 75,316,751
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Usp46, 2700023E23Rik, Rasl11b, Scfd2, Fip1l1, Lnx1
Downstream gene	EG619945, Chic2, Gsh2, LOC100039083, Olfr1401-ps1, Pdgfra, LOC100039125, LOC100039143, LOC100039158, LOC100039169, Kit, EG664874
Link	Open Mouse BAC browser

Click to get alignment info.

name	Usp46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69727 MGI:1916977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2700023E23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70036 MGI:1917286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs

name	Rasl11b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68939 MGI:1916189
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scfd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212986 MGI:2443446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fip1l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66899 MGI:1914149
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lnx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16924 MGI:1278335
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619945 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619945 MGI:3644088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Chic2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74277 MGI:1921527
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gsh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14843 MGI:95843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039083 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039083
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Olfr1401-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404510 MGI:3031235
definition	note : olfactory receptor 1401, pseudogene 1 pseudo : _no_value

name	Pdgfra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18595 MGI:97530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039125 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100039143 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039158 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039169 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Kit (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16590 MGI:96677
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664874 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664874 MGI:3643740
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Usp46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130433 GeneID:69727 MGI:1916977
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin specific peptidase 46 transcript_id : NM_177561.3

name	2700023E23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374810 GeneID:70036 MGI:1917286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 36 ESTs product : RIKEN cDNA 2700023E23 gene transcript_id : XM_884008.2

name	Rasl11b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625707 GeneID:68939 MGI:1916189
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS-like, family 11, member B transcript_id : NM_026878.1

name	Scfd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803222 GeneID:212986 MGI:2443446
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sec1 family domain containing 2 transcript_id : NM_178672.4

name	Fip1l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802634 GeneID:66899 MGI:1914149
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FIP1 like 1 (S. cerevisiae) transcript_id : NM_024183.4

name	Lnx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803103 GeneID:16924 MGI:1278335
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligand of numb-protein X 1 transcript_id : NM_010727.3

name	Chic2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376381 GeneID:74277 MGI:1921527
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteine-rich hydrophobic domain 2 transcript_id : NM_028850.2

name	Gsh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130994 GeneID:14843 MGI:95843
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : genomic screened homeo box 2 transcript_id : NM_133256.2

name	Pdgfra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032049 GeneID:18595 MGI:97530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet derived growth factor receptor, alpha polypeptide transcript_id : NM_011058.2

name	LOC100039125 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253963 GeneID:100039125
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039125 transcript_id : XM_001472317.1

name	Pdgfra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032015 GeneID:18595 MGI:97530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet derived growth factor receptor, alpha polypeptide transcript_id : NM_001083316.1

name	LOC100039143 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253965 GeneID:100039143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039143 transcript_id : XM_001472343.1

name	Kit (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10947120 GeneID:16590 MGI:96677
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kit oncogene transcript_id : NM_021099.2

name	EG664874 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374816 GeneID:664874 MGI:3643740
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG664874 transcript_id : XM_973184.1

name	Usp46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243896 GeneID:69727 MGI:1916977
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin specific protease 46 protein_id : NP_808229.1

name	2700023E23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374811 GeneID:70036 MGI:1917286
definition	codon_start : 1 product : hypothetical protein LOC70036 protein_id : XP_889101.2

name	Rasl11b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625708 GeneID:68939 MGI:1916189
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 product : RAS-like family 11 member B protein_id : NP_081154.1

name	Scfd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982305 CCDS:CCDS19345.1 GeneID:212986 MGI:2443446
definition	GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006904 - vesicle docking during exocytosis [Evidence IEA]; GO:0016192 - vesicle-mediated transport [Evidence IEA] codon_start : 1 product : sec1 family domain containing 2 protein_id : NP_848787.2

name	Fip1l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560210 CCDS:CCDS19346.1 GeneID:66899 MGI:1914149
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA] codon_start : 1 product : FIP1 like 1 protein_id : NP_077145.2

name	Lnx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981642 CCDS:CCDS19347.1 GeneID:16924 MGI:1278335
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0030165 - PDZ domain binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0051260 - protein homooligomerization [Evidence IDA]; GO:0042787 - protein ubiquitination during ubiquitin-dependent protein catabolism [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IDA] codon_start : 1 exception : mismatches in translation product : ligand of numb-protein X 1 protein_id : NP_034857.2

name	Chic2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386358 CCDS:CCDS19349.1 GeneID:74277 MGI:1921527
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0005798 - Golgi-associated vesicle [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_process : GO:0006893 - Golgi to plasma membrane transport [Evidence TAS] codon_start : 1 product : cysteine-rich hydrophobic domain 2 protein_id : NP_083126.1

name	Gsh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18921210 CCDS:CCDS19350.1 GeneID:14843 MGI:95843
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007420 - brain development [Evidence IGI]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0048665 - neuron fate specification [Evidence IMP]; GO:0007389 - pattern specification [Evidence IMP] [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : genomic screened homeo box 2 protein_id : NP_573555.1

name	LOC100039125 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253964 GeneID:100039125
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472367.1

name	Pdgfra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134032016 GeneID:18595 MGI:97530
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0048407 - platelet-derived growth factor binding [Evidence IDA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0009653 - morphogenesis [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : PDGF alpha chain; platelet-derived growth factor receptor alpha product : platelet derived growth factor receptor, alpha polypeptide protein_id : NP_001076785.1

name	Pdgfra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134032050 CCDS:CCDS19351.1 GeneID:18595 MGI:97530
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0048407 - platelet-derived growth factor binding [Evidence IDA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP]; GO:0030324 - lung development [Evidence IMP]; GO:0030539 - male genitalia development [Evidence IMP]; GO:0009653 - morphogenesis [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : PDGF alpha chain; platelet-derived growth factor receptor alpha product : platelet derived growth factor receptor, alpha polypeptide protein_id : NP_035188.2

name	LOC100039143 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253966 GeneID:100039143
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472393.1

name	Kit (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10863917 GeneID:16590 MGI:96677
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005020 - stem cell factor receptor activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence TAS]; GO:0008283 - cell proliferation [Evidence TAS]; GO:0050875 - cellular physiological process [Evidence TAS]; GO:0006935 - chemotaxis [Evidence TAS]; GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence IDA]; GO:0007281 - germ cell development [Evidence TAS]; GO:0030097 - hemopoiesis [Evidence IMP]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0016310 - phosphorylation [Evidence TAS]; GO:0048066 - pigmentation during development [Evidence IMP]; GO:0046777 - protein amino acid autophosphorylation [Evidence TAS]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0009314 - response to radiation [Evidence IMP]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : c-kit proto-oncogene protein; belly-spot; Steel Factor Receptor; Dominant white spotting; dominant spotting; spotted sterile male product : c-kit protein_id : NP_066922.1

name	EG664874 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374817 GeneID:664874 MGI:3643740
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978278.1

name	LOC100039083 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039083
definition	number : 1 pseudo : _no_value

name	LOC100039158 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039158
definition	number : 2 pseudo : _no_value

name	LOC100039158 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039158
definition	number : 1 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 1 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 2 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 3 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 4 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 5 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 6 pseudo : _no_value

name	LOC100039169 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039169
definition	number : 7 pseudo : _no_value

name	EG619945 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149253967 GeneID:619945 MGI:3644088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG619945 transcript_id : XR_035406.1

clone name	MSMg01-357K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476N05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082P19
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-164C16.T7 (MSMg01no164_c16.b1)	MSMg01-164C16.TJ (MSMg01no164_c16.g1)
ACC	AG362731	AG362732
length	845	741
length of high quality (start - end)	257 (43 - 299)	521 (70 - 590)
definition	CHROMAT_FILE: MSMg01no164_c16.b1 PHD_FILE: MSMg01no164_c16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:31:56 2005	CHROMAT_FILE: MSMg01no164_c16.g1 PHD_FILE: MSMg01no164_c16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:31:56 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT TCATAGACAGCAGAAATTTCCTGCCCAGTCCTCTGGAGTCTCCAGAGTTT AAGACCTGCCAATGCAGTATCTGGTGAGGGAGAGAGCTGGCTTCCTGGTT GGAAGGCAGGACCTTAACTATGTTTTTACACAGGGAAAGGACAGGGCCTC TCTCTCTGGCTCTTTTGATTTCAGTTCCTTGTTGTTTGTTTGCATTTGGA ATTTTTTTGTTGTTTGTTTGTTTTTTGTGTTTGTGTGTGTGTGGGTTTAT TTAAAAAAAATTTATATATTTTTTTATTTAATAAAAATTAATACACAGAA AAAAATATTTTTTTTTATTTTCCCCCACAACCCCCCCTAAATAAAATATA TATTATAAAAACTTTTTCTCCCCCCCCAATAAAAAAAAAAAACCACCCGC GTTGGGAGTGGCTTGTTATCTATTACATATATTTTATTTCTTTTTATTTT CTCCTTAATATTAAACCACTCAACTTATTCTCTACACAACATCTAATACC TATAACTCCAACCGAACCATTCGTATACCTGATACATGACAATATTACAA GTACGATAAATTAATTTGATCCCATCTTTTTTTTTAATTATTTACATATA ATTACTACACTTATTTTTATATTTTCTTCATACCTATACTCTTTTACTAT AACAACTATTATAATTTATTATCTATTTTCCACACTTTTCTACCTTATAT CTTCTCATTTTTATTTTTTTTTCCATTTACCACTATTTGTCAATATTTTC TCATATATTTACTATTATGTAACGCTTGCTATATATACAAATAGT	ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXACACACAATCAATTACCAGCTGAGCGAGAGC TCTGAGGCTCTCTGAGTACTGACCCATGCACTGGGATGAAGGCAATCAGG CTCGAGGTCATCTGGGGTCAAGCCCATGGCTTTGGATAGCCATTTGTCAC TTGGAATTGGGCAGGAAACCATAAACACAGGAGGCAGTGAGTGAAGTTAA CTAATTATATACAACTGTGGCCTTAGTTTGGCCTGGCCAAACAGGACAAG ATAAAGGCAGTTTGGAGGCAGAACTGTTTTTAAAAAAAACATAGCGTTCT CCAGCTGGGACACGGAACAGTAAATGCTGGGACACAGGTAGGAACATGAG AAATTCAGGCCTCCACTCATAAGCCAAGCATATAGGGTTGGAGAGGAGCG GAGAGTGAGTTCAAAGCTCCCCACAGTTAAACCAACAAGAGCTGCGTTAC AAGCATCAAGGTGGGGGTAACGACCACGACAGCCAGAGAGAAAAGCAGAC CTTCAAGCATGTTTTGCCACCAGCAAGTAGCTCAGGGAAATGTAACCCAG AACACCCTGGAAGAGGCTGGGTGGTCAAACTGGTCAGCACAGGCATCTCT CATCACTGACAAGGGAAAAATTACAGAGGAAAAGACCCCAGCATTCTCCA GGAGTCAAAGGGGGTGTAGGGTGGGGGTACTGCATGACTGG
quality values	Open. Hide. 31 31 31 37 59 59 39 31 31 31 31 31 36 36 36 36 42 34 39 39 43 57 42 37 40 40 42 42 48 48 48 54 54 54 54 57 57 42 42 41 41 41 41 44 47 48 47 51 50 50 50 50 41 41 41 50 50 50 57 57 57 57 54 47 50 50 50 50 50 68 68 68 68 50 51 51 50 48 48 59 59 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 68 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 57 57 57 57 50 50 57 54 57 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 50 50 50 50 50 50 57 57 57 57 59 59 59 59 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 57 57 57 54 54 57 59 59 59 59 59 59 59 59 59 59 59 59 59 54 57 54 59 57 57 54 54 57 57 59 59 59 48 48 57 48 48 48 48 48 48 48 48 48 46 47 43 37 37 33 21 21 11 10 10 9 9 9 8 8 8 8 8 9 9 9 9 6 8 8 8 11 8 6 6 7 8 15 17 13 8 8 8 9 9 9 8 8 8 13 12 9 8 8 8 8 8 10 8 8 8 8 8 7 8 9 9 12 8 11 6 6 8 11 11 16 18 26 14 12 13 9 9 9 10 10 12 12 15 8 11 7 7 6 6 6 6 7 6 8 9 9 9 9 11 15 17 9 9 9 9 9 8 8 6 6 8 10 9 9 10 10 10 10 9 9 9 11 17 12 12 9 8 8 8 8 11 9 9 9 12 10 10 8 8 8 8 10 11 17 26 22 31 21 16 15 13 8 6 6 8 8 8 8 8 8 8 8 11 15 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 6 6 8 6 8 8 8 10 7 7 10 8 8 8 8 8 9 9 9 11 9 8 8 10 8 8 8 10 8 8 8 8 8 8 8 8 13 10 13 14 10 8 8 6 6 8 8 8 8 8 8 9 11 10 9 10 10 10 12 15 13 10 8 8 8 10 10 12 16 11 8 8 6 6 8 8 9 9 9 9 9 9 12 9 10 10 10 11 11 8 8 6 6 8 6 8 8 8 10 12 6 6 8 8 10 8 8 8 8 6 6 6 6 8 8 8 8 8 8 8 6 8 6 6 8 8 8 8 8 9 8 8 6 6 8 8 9 10 9 8 8 8 8 10 8 9 9 9 9 9 8 8 8 8 8 8 12 12 16 10 10 11 11 11 12 10 12 15 10 10 8 8 8 8 8 8 9 8 8 6 7 8 10 11 11 10 10 9 8 8 8 10 8 8 9 12 10 10 10 10 10 13 10 9 9 9 9 10 10 13 9 9 9 9 10 8 8 6 6 8 8 11 11 11 11 11 10 13 8 8 6 6 8 10 10 10 10 8 8 8 8 8 6 7 10 8 12 14 13 11 8 8 8 6 6 8 12 10 10 8 8 6 6 6 7 15 15 10 7 12 8 8 8 10 10 8 8 8 8 13 15 12 10 8 8 8 9 13 11 16 11 11 11 17 19 24 19 10 10 10 8 8 12 8 12 15 18 8 8 6 6 6 6 8 8 11 8 8 8 8 8 8 8 8 8 6 6 9 8 8 8 8 8 12 8 8 8 8 8 8 8 8 12 9 9 9 8 8 8 8 8 8 12 9 10 10 10 8 8 8 8 8 8 8 8 8 8 10 8 9 9 9 9 9	Open. Hide. 11 11 9 9 21 15 19 11 10 10 21 31 50 50 50 50 50 50 59 59 59 50 42 41 23 15 8 7 8 8 9 8 11 11 13 17 16 21 21 26 37 37 41 47 47 50 53 53 53 53 53 57 43 41 26 21 26 18 23 19 18 16 20 17 33 42 42 48 48 54 54 50 50 50 50 48 48 48 54 54 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 54 57 57 57 57 57 57 57 57 68 68 68 57 57 57 68 68 57 57 50 50 51 50 50 57 57 57 68 68 68 68 68 57 57 57 57 57 57 68 68 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 57 57 57 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 44 43 39 39 39 29 29 35 43 44 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 45 45 45 59 43 45 45 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 52 45 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 43 44 43 52 52 52 52 52 57 57 57 57 57 52 52 52 57 57 57 59 57 57 57 59 43 35 35 39 39 39 42 33 33 33 43 43 52 52 52 57 57 52 43 42 35 35 35 43 37 43 43 59 59 59 59 57 57 57 57 57 59 59 59 54 54 52 52 52 52 57 52 52 52 57 57 52 52 52 52 52 52 48 50 50 59 59 68 68 57 57 57 57 57 57 57 59 57 57 57 48 48 48 57 57 43 43 43 44 44 47 47 57 48 54 54 57 57 46 43 43 43 46 46 48 44 44 43 39 39 37 37 43 43 43 48 48 37 37 23 20 20 32 31 43 42 37 30 28 32 28 43 39 43 43 43 44 48 39 39 32 32 30 33 30 30 37 32 35 32 34 25 28 34 34 43 35 17 17 17 15 19 19 25 18 18 14 24 27 23 22 12 12 12 16 24 37 39 39 34 34 24 17 21 15 15 16 19 21 28 28 34 32 34 23 18 18 28 28 37 37 43 39 39 28 22 21 22 22 28 24 29 24 22 18 28 30 31 37 37 41 32 34 23 26 26 34 32 29 19 19 15 15 12 10 13 14 14 17 18 16 18 17 14 12 18 18 22 28 34 21 18 10 10 10 12 18 32 29 19 24 17 14 14 26 30 30 31 35 35 29 19 23 19 19 21 21 13 15 18 32 28 35 28 25 25 23 10 10 9 9 9 11 32 27 15 15 15 15 15 9 10 12 12 6 6 8 10 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no164_c16.g1 MSMg01no164_c16.g1 CHROMAT_FILE:
MSMg01no164_c16.g1 PHD_FILE: MSMg01no164_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:56 2005
         (521 letters)



>mm_chr5_75316031_75316951
          Length = 921

 Score =  953 bits (493), Expect = 0.0
 Identities = 514/521 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acacacaatcaattaccagctgagcgagagctctgaggctctctgagtactgacccatgc 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 721 acacacaatcaattaccagctgagcgagagctctgagggtctctgagtactgacccatgc 662

                                                                       
Query: 61  actgggatgaaggcaatcaggctcgaggtcatctggggtcaagcccatggctttggatag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 actgggatgaaggcaatcaggctcgaggtcatctggggtcaagcccatggctttggatag 602

                                                                       
Query: 121 ccatttgtcacttggaattgggcaggaaaccataaacacaggaggcagtgagtgaagtta 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 601 ccatttgtcacttggaattgggcaggaaaccataaacacaggaggcagtgagtgaactta 542

                                                                       
Query: 181 actaattatatacaactgtggccttagtttggcctggccaaacaggacaagataaaggca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 actaattatatacaactgtggccttagtttggcctggccaaacaggacaagataaaggca 482

                                                                       
Query: 241 gtttggaggcagaactgtttttaaaaaaaacatagcgttctccagctgggacacggaaca 300
           ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtttggaggcagaactgtttaaaaaaaaaacatagcgttctccagctgggacacggaaca 422

                                                                       
Query: 301 gtaaatgctgggacacaggtaggaacatgagaaattcaggcctccactcataagccaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtaaatgctgggacacaggtaggaacatgagaaattcaggcctccactcataagccaagc 362

                                                                       
Query: 361 atatagggttggagaggagcggagagtgagttcaaagctccccacagttaaaccaacaag 420
           ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 atatagggttggagaggagtggagagtgagttcaaagctccctacagttaaaccaacaag 302

                                                                       
Query: 421 agctgcgttacaagcatcaaggtgggggtaacgaccacgacagccagagagaaaagcaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agctgcgttacaagcatcaaggtgggggtaacgaccacgacagccagagagaaaagcaga 242

                                                    
Query: 481 ccttcaagcatgttttgccaccagcaagtagctcagggaaa 521
           ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 241 ccttcaagcatgtttcgccaccagcaagtagctcagggaaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space:   465521
Effective search space used:   465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information