Query= MSMg01no164_k04.b1 MSMg01no164_k04.b1 CHROMAT_FILE:
MSMg01no164_k04.b1 PHD_FILE: MSMg01no164_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:32 2005
(315 letters)
>mm_chr5_99075521_99076235
Length = 715
Score = 532 bits (275), Expect = e-155
Identities = 302/311 (97%)
Strand = Plus / Minus
Query: 4 ggaattctttttggtcactactacttggtgcagcatttgcttattgaaatattactcacc 63
||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 471 ggaattcttttgggtcactaccacttggtgcagcatttgcttattgaaatattactcatc 412
Query: 64 atgatttatttagatgctattacttcctttatggaaacagtctcttgacatccaagctat 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 411 atgatttatttagatgctattacttcctttatggaaacagtctcttgacgtccaagctat 352
Query: 124 tctcaagcctgatttgtgaaggagggtatccttcagttcttgatccttctcccatatagg 183
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 351 tctcaagcctgatttgtgaaggaaggtatccttcagttcttgatccttctcccatatagg 292
Query: 184 cacaaaccttcaagtgtggtttaatgagaaaccttttccatactttaaaaatattttctg 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 291 cacaaaccttcaagtgtggtttaatgagaaaccttttccgtactttaaaaatattttgtg 232
Query: 244 attgtgtgatgtaaatgatacctacctctatgtaggtgcacatgtgtatacatgtgtgtg 303
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 231 attgtgtggtgtaaatgatacctacctctatgtaggtacacatgtgtatacatgtgtgtg 172
Query: 304 tgtgtgtgtgt 314
|||||||||||
Sbjct: 171 tgtgtgtgtgt 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_k04.g1 MSMg01no164_k04.g1 CHROMAT_FILE:
MSMg01no164_k04.g1 PHD_FILE: MSMg01no164_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:33 2005
(406 letters)
>mm_chr5_98933527_98934333
Length = 807
Score = 772 bits (399), Expect = 0.0
Identities = 405/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 1 caatgaatatcactcatcaggaagtttggtactaacaataacaaagatagctttcaaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgaatatcactcatcaggaagtttggtactaacaataacaaagatagctttcaaagt 260
Query: 61 gacaagaaggatgtaagagttgtttatctttgaaatgtagaccaattatcatctaacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaagaaggatgtaagagttgtttatctttgaaatgtagaccaattatcatctaacttg 320
Query: 121 attttaaaatacagtgatgaatgtgacagacaaagttagttataagacacttctaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttaaaatacagtgatgaatgtgacagacaaagttagttataagacacttctaatttg 380
Query: 181 atttttatgttaataggaaaaaa-tattacattatattgaaaagattttcttctgagttt 239
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttatgttaataggaaaaaaatattacattatattgaaaagattttcttctgagttt 440
Query: 240 cttgttgtatgtaatttaataccacaggagactggcatacacagtgtcagcagcgtatat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgttgtatgtaatttaataccacaggagactggcatacacagtgtcagcagcgtatat 500
Query: 300 gcatatatgcatatatgttacagaggcttctttcccaacaggaagtacaagtatcaaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatatatgcatatatgttacagaggcttctttcccaacaggaagtacaagtatcaaaaa 560
Query: 360 gatgatttatcactttggtcaacactacaggggctgagtagcccagc 406
|||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 gatgatttatcactttggtcaacactacagggtctgagtagcccagc 607
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 807
Length adjustment: 9
Effective length of query: 397
Effective length of database: 798
Effective search space: 316806
Effective search space used: 316806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
