CATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTTACCCACAGACAGACTGGCTGGGTACCAGCCATTTGGCCCAC
CCACCCAGGACAGTTCTGTCTGTGGTTAATGTTATGACCCAGCAAGATGC
TCTTTATCTTTGGTGAAACTCTCCCGGGGCTTTAAAAGGAGCAATGATCA
AGTGAAGCTCAGGGAGAGCCACAAGACATCTCTGCGCTCAGTGACTAAGG
CATACCTGGCAGCAGGCTTCCTATAGACTCCGCTGCCTCTCACTGCTGCT
TTAAGAAATAGGTTAAATCTGGAATCTAGCATGAAGTGTGAGCAGGCTCA
AGCTCAACCAAGAAAGTCCTCACGACTAAAGGAAAGCCAGCACCACGGAC
CCTGCACCAGATCTTTGAAGACTTCTTCAGGATTTATTGAACATCTAGTA
TGATACTGCAAATTGAGCATGCTGTGGTTTCATCTCTCCACCCTGGACAG
AAAGTATCTTCCTGGGGACCAAATGATTTCCTTCAGTGCTAGGGAGTAGG
AGGAAAAAAAAAAATCAAGTGACTTTCCAATGTTGTTTCCTTCTGCCACA
GGCTAAAGATACTGAGGGTACAAAGGGTGGAAAAGAATCTCAAGATCAGT
CTTGTTGAGGAATAACATAGACTCAGTTCACCCAGAAGACTGGAGTTCAA
TCTGAAAAACACTGCCTCCTAGAGGCTTGCCATGTTTTTTT

CCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGGGGTACATTCAAGAGACCAAAC
CATGGGACAGAGAGATCTGGATAAACAACAAATAGAATAGATAAATTATC
ATTAAAAAAGCCATAGCAGAAAAGTATGCAAATCTAGGGAAAGAAGTTGA
CAACCAAACGCAAGAGGCATTTAAACCCAAACACACGAGCAGAGAAGAAC
GTCCCCATAGCAAGTTACAGCAAAGATGTCAAAAAATACAAAGTAAAGAC
AGAGTCTAAAATCCATAGAGGGGGAACCAGACTCACACACAAAAGCAGAG
ATATTGGAAGGACGTCAGATCTATCATCATAAAAGCTCTCAAGCCAGGAG
AGCAGGAAATTATGTAGATTCCAGGCCCTGAAAGTACATAACTGTCAACC
GAGAGTGCTGTGCCCAGCAAAGCTTTCTCTCAAAACGGATGGAGAAATAA
GGGTATCCCAGACCAGTACAAACTAAGGGCTCTGCCCTGGTCTCTCAACC
CATGAGCCGTGCGGGACTGAATGCTAACTCAGACCTATTGGCCCATGAGT
CTTAAGAGTCTTANAGAACGCATCCAGTAGTGCCAAAGTCCAGAGCTACA
TCCCCACTGTGGCTGCACACAGAAAGTCTATCAGTATCAAGGTACTGGAG
ATGCTAGTTGAGAAGTTTGTCCTTCCAGGTCTCTGGCTTGTCCAGGN

Query= MSMg01no166_j03.b1 MSMg01no166_j03.b1 CHROMAT_FILE:
MSMg01no166_j03.b1 PHD_FILE: MSMg01no166_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:06 2005
         (618 letters)



>mm_chr5_117180834_117181850
          Length = 1017

 Score = 1149 bits (594), Expect = 0.0
 Identities = 609/614 (99%), Gaps = 1/614 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttacccacagacagactggctgggtaccagccatttggcccacccacccagga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttacccacagacagactggctgggtaccagccatttggcccacccacccagga 264

                                                                       
Query: 65  cagttctgtctgtggttaatgttatgacccagcaagatgctctttatctttggtgaaact 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 cagttctgtctgtggttaatgttatgacccaggaagatgctctttatctttggtgaaact 324

                                                                       
Query: 125 ctcccggggctttaaaaggagcaatgatcaagtgaagctcagggagagccacaagacatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcccggggctttaaaaggagcaatgatcaagtgaagctcagggagagccacaagacatc 384

                                                                       
Query: 185 tctgcgctcagtgactaaggcatacctggcagcaggcttcctatagactccgctgcctct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 tctgcgctcagtgactaaggcatacctggcagcaggcttcctatagactccactgcctct 444

                                                                       
Query: 245 cactgctgctttaagaaataggttaaatctggaatctagcatgaagtgtgagcaggctca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactgctgctttaagaaataggttaaatctggaatctagcatgaagtgtgagcaggctca 504

                                                                       
Query: 305 agctcaaccaagaaagtcctcacgactaaaggaaagccagcaccacggaccctgcaccag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctcaaccaagaaagtcctcacgactaaaggaaagccagcaccacggaccctgcaccag 564

                                                                       
Query: 365 atctttgaagacttcttcaggatttattgaacatctagtatgatactgcaaattgagcat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atctttgaagacttcttcaggatttattgaacatctagtatgatactgcaaattgagcat 624

                                                                       
Query: 425 gctgtggtttcatctctccaccctggacagaaagtatcttcctggggaccaaatgatttc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctgtggtttcatctctccaccctggacagaaagtatcttcctggggaccaaatgatttc 684

                                                                       
Query: 485 cttcagtgctagggagtaggaggaaaaaaaaaaatcaagtgactttccaatgttgtttcc 544
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 685 cttcagtgctagggagtaggaggaaaaaaaaaa-tcaagtgactttccaatgttgtttcc 743

                                                                       
Query: 545 ttctgccacaggctaaagatactgagggtacaaagggtggaaaagaatctcaagatcagt 604
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 744 ttctgccacaggctaaagatactgagggtacaaaggttggaaaagaatctcaagatcagt 803

                         
Query: 605 cttgttgaggaata 618
           | ||||||||||||
Sbjct: 804 catgttgaggaata 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1017
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1007
Effective search space:   612256
Effective search space used:   612256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)