Query= MSMg01no169_n17.b1 MSMg01no169_n17.b1 CHROMAT_FILE:
MSMg01no169_n17.b1 PHD_FILE: MSMg01no169_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:40 2005
(319 letters)
>mm_chr5_83265652_83266370
Length = 719
Score = 429 bits (222), Expect = e-125
Identities = 246/256 (96%), Gaps = 4/256 (1%)
Strand = Plus / Plus
Query: 4 ggaattctctctttaccagtattcattttcataataacagtttggagagccatagagatt 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaattctctctttaccagtattcattttcataataacagtttggagagccataaagatt 263
Query: 64 ttcaccacacaatgtgtttcaacagtaaatgcctgaaaacacctcatgagtattctgcac 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 ttcaccacacaatgtgtttcaacagtaaatgcctgaaaacacctcatgagtattcttcac 323
Query: 124 gcacagtgcttgtgcacccaactcctctgctgaggctggttgtctttcctgtgcgccagt 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcacagtgcttgtgcccccaactcctctgctgaggctggttgtctttcctgtgcgccagt 383
Query: 184 tatatatcctaagactttcactgtgttcttctcagatttcaacaaaagcaagcaaacaaa 243
||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 384 tatatatcctaaggctttctctgtgttcttctcagatttcaacaaaagcaaacaaacaaa 443
Query: 244 ----gaaacacacaca 255
||||||||||||
Sbjct: 444 caaagaaacacacaca 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_n17.g1 MSMg01no169_n17.g1 CHROMAT_FILE:
MSMg01no169_n17.g1 PHD_FILE: MSMg01no169_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:40 2005
(285 letters)
>mm_chr5_83436002_83436686
Length = 685
Score = 538 bits (278), Expect = e-157
Identities = 281/282 (99%)
Strand = Plus / Minus
Query: 1 tttgatgggctgatggacactaactgtttattaattcacctgcacatctactgcacagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tttgatgggctgatggacactaactgtttattaattcacctgcacatctactgcacagct 423
Query: 61 tcggtctggcttcttctctgtatggcttcatttttgcatttgcccatacttgaagagggc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcggtctggcttcttctctgtacggcttcatttttgcatttgcccatacttgaagagggc 363
Query: 121 atctaagtatatttacaagggaagacatgtgggagttggttattacgatgttgaatgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atctaagtatatttacaagggaagacatgtgggagttggttattacgatgttgaatgcaa 303
Query: 181 actttagatacatgagtactctttaagggtcaaaagaaacagaagtgatcttacatagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 actttagatacatgagtactctttaagggtcaaaagaaacagaagtgatcttacatagat 243
Query: 241 aggttcctactgtagcagtagaaagtacttggaattttaata 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggttcctactgtagcagtagaaagtacttggaattttaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
