Query= MSMg01no170_i24.b1 MSMg01no170_i24.b1 CHROMAT_FILE:
MSMg01no170_i24.b1 PHD_FILE: MSMg01no170_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:33 2005
(322 letters)
>mm_chr5_132699599_132700321
Length = 723
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 5 gaattcaacatcttactcctatgaaccctttctcaatggagggccatgtaccatcactgc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaattcaacatcttactcctatgaaccctttctcaatggagggccatgtaccatcactgc 463
Query: 65 tgcttttaggctatggtgctgtgctgtctaggtagatccttctcatctctgtaggatgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tgcttttaggctatggtgctgtgctgtctaggtagatccttctcatctctgtaggatgga 403
Query: 125 gaaagagaattgagcaaatgttctttt-tgatagctgtcatcttatacctgtgttaagtc 183
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 402 gaaagagaattgagcaaatgttcttttctgatagctgtcatcttatacctgtgttaagtc 343
Query: 184 agatagctgtcagttcttacagcttccaagagagaactgtctctatagccattgtcagcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agatagctgtcagttcttacagcttccaagagagaactgtctctatagccattgtcagcc 283
Query: 244 tactgaatgaggtatgctgatgtggtgtggggatcatgtatcatctataatcaggccttg 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 282 tactgaatgaggtatgctgatgtggtgtggggatcatgtagcatctataatcaggccttg 223
Query: 304 gagaagcagccataatga 321
|||||||| |||||||||
Sbjct: 222 gagaagcatccataatga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 723
Length adjustment: 9
Effective length of query: 313
Effective length of database: 714
Effective search space: 223482
Effective search space used: 223482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_i24.g1 MSMg01no170_i24.g1 CHROMAT_FILE:
MSMg01no170_i24.g1 PHD_FILE: MSMg01no170_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:33 2005
(298 letters)
>mm_chr5_132532748_132533445
Length = 698
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%)
Strand = Plus / Plus
Query: 1 ttcctatggaaggaaagggactaaaacaagcgcataatattctattctaaccagggttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctatggaaggaaagggactaaaacaagcgcataatattctattctaaccagggttga 260
Query: 61 aaaaattaaaacattatcaagacagatgccaggatctccaaacatggaagaaagggccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaattaaaacattatcaagacagatgccaggatctccaaacatggaagaaagggccac 320
Query: 121 ttgaagacataggcagaacatgcaagataagcacagaggcccactagacagccaaatggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaagacataggcagaacatgcaagataagcacagaggcccactagacagccaaatggc 380
Query: 181 agaaaccctggcattttcccttttcttttgtttctaatttttggatctcaggggatggga 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 agaaaccctggcattttcccttttcttttgtttctactttttggatctcaggggatggga 440
Query: 241 tggatttaggcttttgtacaggcaagccaagctgtttactgctg 284
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagatttaggcttttgtacaggcaagccaagctgtttactgctg 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
