Query= MSMg01no171_p17.b1 MSMg01no171_p17.b1 CHROMAT_FILE:
MSMg01no171_p17.b1 PHD_FILE: MSMg01no171_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:20 2005
(318 letters)
>mm_chr5_136788926_136789641
Length = 716
Score = 571 bits (295), Expect = e-167
Identities = 308/313 (98%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcccggctgcaacgtacaagaaaggtgcaaacacgaatgcatgtggcttgttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggaattctcccggctgcaacgtacaagaaaggtgcaaacacgaatgcatgtggcttgttt 455
Query: 64 tggggggccttgtttgcctgattcacaaattcaatcgaaaaacaaaccaacacaccactt 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tggggggccttgtttggctgattcacaaattcaatcgaaaaacaaaccaacacaccactt 395
Query: 124 tggcccttgttttaaaaaaaaaaaaaattgaaaagaaaaatctgcactttttttgtgggg 183
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tggcccttgtttt--aaaaaaaaaaaattgaaaagaaaaatctgcactttttttgtgggg 337
Query: 184 cacactttgcattctggtcttggttttttttcccttttgaatcccccataatgcattctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cacactttgcattctggtcttggttttttttcccttttgaatcccccataatgcattctg 277
Query: 244 tttgcccttccttgtagggtcagccaggagaaaaggtatagaccagcctgagagtcggcg 303
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 276 tttgcccttccttgtagggtcagccaggagaaaagggagagaccagcctgagagtcggcg 217
Query: 304 cccgggacccttg 316
|||||||||||||
Sbjct: 216 cccgggacccttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_p17.g1 MSMg01no171_p17.g1 CHROMAT_FILE:
MSMg01no171_p17.g1 PHD_FILE: MSMg01no171_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:20 2005
(231 letters)
>mm_chr5_136703943_136704573
Length = 631
Score = 431 bits (223), Expect = e-125
Identities = 229/231 (99%)
Strand = Plus / Plus
Query: 1 ctgatgggcacagctgatctcatcttcacacttacctgtggctggggttggccatcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatgggcacagctgatctcatcttcacacttacctgtggctggggttggccatcttgg 260
Query: 61 gacagggagagtggtcaggtttacaatggcaccttcacctgggctcctactagctggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacagggagagtggtcaggtttacaatggcaccttcacctgggctcctactagctggaga 320
Query: 121 tactgtgttccttatctcaggctaatgtctgagatcatctatcctgacatagttgtagtt 180
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 321 tactgtgttccttatctcaggctaatgtctgagatcatttgtcctgacatagttgtagtt 380
Query: 181 gtcccctacccctagtgctagggtagaatccagggcttcattattgctagg 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcccctacccctagtgctagggtagaatccagggcttcattattgctagg 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 631
Length adjustment: 9
Effective length of query: 222
Effective length of database: 622
Effective search space: 138084
Effective search space used: 138084
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
