Query= MSMg01no174_g06.b1 MSMg01no174_g06.b1 CHROMAT_FILE:
MSMg01no174_g06.b1 PHD_FILE: MSMg01no174_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:15 2005
(323 letters)
>mm_chr5_79300132_79300852
Length = 721
Score = 559 bits (289), Expect = e-164
Identities = 311/319 (97%), Gaps = 2/319 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagataaaaggatcaaatacaaattattccaatgtactatgaaggtggcacagc 63
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggaattcagataaaaggaaaaaatacaaattattccaatgtactatgaaggtggcacagc 461
Query: 64 aggacaggaatattagcccgaggaagaaacttgagagcatcgagcattagtattggttat 123
|||||||||||| || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aggacaggaataaaagtcagaggaagaaacttgagagcatcgagcattagtattggttat 401
Query: 124 gtgtcaagtcttatcgaaattctatttgagctgacatctgtaagaaaggaacattcagca 183
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gtgtcaagtc--atcgaaattctatttgagctgacatctgtaagaaaggaacattcagca 343
Query: 184 tagaacccagagaggacaacctggagaacatcgatggctgaacaaatgaataagatagta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tagaacccagagaggacaacctggagaacatcgatggctgaacaaatgaataagatagta 283
Query: 244 gcaggaaatgatgcagagaagctaaccaagaacaagctggatcgagctctgtaaagaatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gcaggaaatgatgcagagaagctaaccaagaacaagctggatcgagctctgtaaagaatt 223
Query: 304 gcaaagacaattagctgtc 322
|||||||||||||||||||
Sbjct: 222 gcaaagacaattagctgtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 721
Length adjustment: 9
Effective length of query: 314
Effective length of database: 712
Effective search space: 223568
Effective search space used: 223568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_g06.g1 MSMg01no174_g06.g1 CHROMAT_FILE:
MSMg01no174_g06.g1 PHD_FILE: MSMg01no174_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:15 2005
(289 letters)
>mm_chr5_79228526_79229214
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Plus
Query: 1 tgtatctctaaaaagcttaatattaaatttattaagaattaatacaattcaatagcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatctctaaaaagcttaatattaaatttattaagaattaatacaattcaatagcaaca 260
Query: 61 agaaataatgatctttcaaataggcaaaaaaccccaatagagacttttgtgaagaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaataatgatctttcaaataggcaaaaaaccccaatagagacttttgtgaagaagaaa 320
Query: 121 tgggacagtcagcaagagtttgaagaaaagaagctcagctttgacgttatttatgggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggacagtcagcaagagtttgaagaaaagaagctcagctttgacgttatttatgggaaa 380
Query: 181 ttaaattcacatgtcctcgttaaaagggcatgagagaataaatgcacatgaaagacaaga 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaattcacatgtccccgttaaaagggcatgagagaataaatgcacatgaaagacaaga 440
Query: 241 acaacaatcctgtgttcctcatgaaatgagggatgaagggtgaagacta 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaacaatcctgtgttcctcatgaaatgagggatgaagggtgaagacta 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
