Query= MSMg01no174_g23.b1 MSMg01no174_g23.b1 CHROMAT_FILE:
MSMg01no174_g23.b1 PHD_FILE: MSMg01no174_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:18 2005
(325 letters)
>mm_chr5_14622246_14622970
Length = 725
Score = 433 bits (224), Expect = e-126
Identities = 283/320 (88%), Gaps = 30/320 (9%)
Strand = Plus / Plus
Query: 5 gaattcatcctcagaactccactagcttactatgacatgtatatttgcacatgtgcacgc 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 235 gaattcatcctcagaactccactagcttactatgacatgtatatctgcacatgtgcacgc 294
Query: 65 atacacacacagagacacacacacacacacacacacacaggcacacacacacacacacac 124
| |||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 295 acacacacacagag--------acacacacacacacacatgcacacacacacacacacac 346
Query: 125 acagacacagagagagcgagagagagagaggagggagagagaataaataaaatgtatatg 184
||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 347 ----acacagaga-------------aga-----gagagagaataaataaaatgtatatg 384
Query: 185 catgtgtgtgcatgtgtacatatagatatatgtatattgtaagattccaaaaggcccctt 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catatgtgtgcatgtgtacatatagatatatgtatattgtaagattccaaaaggcccctt 444
Query: 245 agatttgtagtgcatcggctatataaagctgtttatagtgactttcaatcattctagcag 304
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 445 agatttgtagtgcatcggctatatgaagctgtttatagtgaccttcaatcattctagcag 504
Query: 305 gaaaattatgtaaatgttta 324
||||||||||||||| ||||
Sbjct: 505 gaaaattatgtaaatattta 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_g23.g1 MSMg01no174_g23.g1 CHROMAT_FILE:
MSMg01no174_g23.g1 PHD_FILE: MSMg01no174_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:18 2005
(342 letters)
>mm_chr5_14760988_14761729
Length = 742
Score = 661 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Minus
Query: 1 cttaaatgatttgcttaacaccaggagactgctgaagattctatttgcatacagtaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 cttaaatgatttgcttaacaccaggagactgctgaagattctatttgcatacagtaaata 483
Query: 61 accatatagtgttaagcaatatctaagtctaagaatggtgatattattcagagttgctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 accatatagtgttaagcaatatctaagtctaagaatggtgatattattcagagttgctgg 423
Query: 121 gatgccatcctgttatctgatggaaagtaaagcatacaggaaacatttatgaaattatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gatgccatcctgttatctgatggaaagtaaagcatacaggaaacatttatgaaattatag 363
Query: 181 tagagaatcagttttagtgaaggaatggtgtgtcatgttttccaaagtattaaacaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tagagaatcagttttagtgaaggaatggtgtgtcatgttttccaaagtattaaacaactc 303
Query: 241 ttattccgtttgcctgggtaagtaattccatgagggatgacattgcctcaaagtaaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttattccgtttgcctgggtaagtaattccatgagggatgacattgcctcaaagtaaaatt 243
Query: 301 gctacaagatgtccttaggttccatgactgccattgaacaca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gctacaagatgtccttaggttccatgactgccattgaacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
