TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCTGAGGAAACCAAATGGCAGAGAAGCACCTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGAGGATGTGGAGAAGAGGAACACTCCTCCATTGTTGGTGGGA
TTTCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTCCTCAGAA
AATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATA
TATCTATTTTTTGTTCCCACCTCCCCCCACAGACACATGCTCTACTATGT
TCATAGCAGCCTTATTTATAATAACCAGAAGCTGGAAAGAACCCAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGG
AACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCATAACCTA
GGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAA
AAATGAAGACTGAAGTGTGGACTCTATGCCCCTCCTTAAAAGTGGAN

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGCTTCCTGAAACACCTCTGAGA
CCCAAACATCAAACACCACTGAAACCTAAGGAGTTGCCTTGGAGCCAACA
CAGTTTTCAAATCCTCCATACTGAAGGAACAATACTGTCAATATTTGAAA
GAAATTCTCCAGTGGGTTTCATACCCAACCCTTGTGGAAAGATGGATGAG
TGTTTAAATTTCTATGAACATTTACAGTAACTTTGAGTTGCATATAAACA
CCAAAAAAATCAGTTAAAATATACAGAATCTTTGGATATTTATCATAGGC
TAACATAGAGAGTTACTTATTCCTTTGCCTTATTCTATACATTTTATATT
CTATTCATTTTATAATTTCACTGGAAATTACAAAAACTAATCAGGCAATG
TAAATAACACTGATTATATACAAAAATATAAATATCAATGCATTTTTGCA
TTGTTTTGTTTATACGTGTGCAGACATAAATATATGTATATTCATGTGTT
TATTCACATCTTATATTCAGCATTGGAGAAAATAACGTCACTGTTTTTGA
ACTGTGATTTTTGTACATTTGAGTTTTTAAGCTATTTTGTCCTAGAACTA
AGTTTCAGCTCCTAAGAACTCATTCTCCTTCATGCAATTCCATTCAGCCC
ACTCCACTAGTCTTTTGAGTCATCTAAAGAT

Query= MSMg01no174_i19.g1 MSMg01no174_i19.g1 CHROMAT_FILE:
MSMg01no174_i19.g1 PHD_FILE: MSMg01no174_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:26 2005
         (655 letters)



>mm_chr5_47283824_47284882
          Length = 1059

 Score = 1147 bits (593), Expect = 0.0
 Identities = 641/659 (97%), Gaps = 4/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgcttcctgaaacacctctgagacccaaacatcaaacaccactgaaacctaaggagttg 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 859 ctgcttcctgaaacacctctgagacccaaacatcaaacaccactgaaagctaaggagttg 800

                                                                       
Query: 61  ccttggagccaacacagttttcaaatcctccatactgaaggaacaatactgtcaatattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ccttggagccaacacagttttcaaatcctccatactgaaggaacaatactgtcaatattt 740

                                                                       
Query: 121 gaaagaaattctccagtgggtttcatacccaacccttgtggaaagatggatgagtgttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaaagaaattctccagtgggtttcatacccaacccttgtggaaagatggatgagtgttta 680

                                                                       
Query: 181 aatttctatgaacatttacagtaactttgagttgcatataaacacc----aaaaaaatca 236
           ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||| 
Sbjct: 679 aatttctatgaacatttacagtaactttgagttgcatataaacaccaaaaaaaaaaatcg 620

                                                                       
Query: 237 gttaaaatatacagaatctttggatatttatcataggctaacatagagagttacttattc 296
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 619 gttaaaatatacagaatctttggatatttatcataggctaacatagagagttacatagtc 560

                                                                       
Query: 297 ctttgccttattctatacattttatattctattcattttataatttcactggaaattaca 356
           ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 559 ctttgtcttattctatacattttatattctattcattttataatttcactgaaaattaca 500

                                                                       
Query: 357 aaaactaatcaggcaatgtaaataacactgattatatacaaaaatataaatatcaatgca 416
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaaactaagcaggcaatgtaaataacactgattatatacaaaaatataaatatcaatgca 440

                                                                       
Query: 417 tttttgcattgttttgtttatacgtgtgcagacataaatatatgtatattcatgtgttta 476
           ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 439 tttttgcattgttttgtttatacatgtgcaggcataaatatatgtatattcatgtgttta 380

                                                                       
Query: 477 ttcacatcttatattcagcattggagaaaataacgtcactgtttttgaactgtgattttt 536
           ||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 379 ttcacattttatattcagcattggagaaaatagcatcactgtttttgaactgtgattttt 320

                                                                       
Query: 537 gtacatttgagtttttaagctattttgtcctagaactaagtttcagctcctaagaactca 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtacatttgagtttttaagctattttgtcctagaactaagtttcagctcctaagaactca 260

                                                                      
Query: 597 ttctccttcatgcaattccattcagcccactccactagtcttttgagtcatctaaagat 655
           | |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgctccttcatgcaattcaattcagcccactccactagtcttttgagtcatctaaagat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1059
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1049
Effective search space:   676605
Effective search space used:   676605
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)