Query= MSMg01no175_i21.b1 MSMg01no175_i21.b1 CHROMAT_FILE:
MSMg01no175_i21.b1 PHD_FILE: MSMg01no175_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:39 2005
(316 letters)
>mm_chr5_83573521_83574237
Length = 717
Score = 561 bits (290), Expect = e-164
Identities = 305/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 5 gaattccatgcaacttgaatataactacatgtgtgtgtgatcaaaaaatgaataagaaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatgcaacttgaatataactacatgtgtgtgtgatcaaaaaatgaataagaaca 264
Query: 65 aagaaatatttagaatttacaaggaagaatagcaggtttataggatgcagataatcatac 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagaaatatttagaatttacaaggaagaatagcaggtttataggatgcagataatcatat 324
Query: 125 tatgatgaattgctttaagaatagcatcaaacacgtgtatacttggcttttcagtatgta 184
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 325 tatgatgaattgctttaagaataccatcaaacacgtgtatacttggcttttcagtatata 384
Query: 185 ctattcgcattagtatagaaaatacaatgtttaacaaaatttgatcatgtgtgaatgaat 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctattcgcattagtattgaaaatacaatgtttaacaaaatttgatcatgtgtgaatgaat 444
Query: 245 ttcaggttaggaattctgagactaagaaaatggaaaaaaaaac-taaataaattttcttt 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 ttcaggttaggaattctgagactaagaaaatggaaaaaaaaacctaaataaattttcttt 504
Query: 304 ttatatgata 313
||||||||||
Sbjct: 505 ttatatgata 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 717
Length adjustment: 9
Effective length of query: 307
Effective length of database: 708
Effective search space: 217356
Effective search space used: 217356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_i21.g1 MSMg01no175_i21.g1 CHROMAT_FILE:
MSMg01no175_i21.g1 PHD_FILE: MSMg01no175_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:39 2005
(642 letters)
>mm_chr5_83657644_83658685
Length = 1042
Score = 1183 bits (612), Expect = 0.0
Identities = 618/620 (99%)
Strand = Plus / Minus
Query: 4 gggggggaaaacaaaacaaaacaaaaaagaaataacagactgtcttgaaacttgccactt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggggggaaaacaaaacaaaacaaaaaagaaataacagactgtcttgaaacttgccactt 561
Query: 64 acagtgtaagtggagaaatgaaacataagatatactgtagtttgtagctctattgaacat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acagtgtaagtggagaaatgaaacataagatatactgtagtttgtagctctattgaacat 501
Query: 124 gtaaagatggcatctatatgttttcaaaaattttaataattctttgagaaatttttactg 183
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtaaagatggcatctgtatgttttcaaaaattttaataattctttgagaaatttttactg 441
Query: 184 tgtatttgaaaatattcacctcttttccaaagtcctcctataattgccctctatgccctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtatttgaaaatattcacctcttttccaaagtcctcctataattgccctctatgccctc 381
Query: 244 ccttcttacccacattgatattcttttttttttcaattttttattagatattgtcaagta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccttcttacccacattgatattcttttttttttcaattttttattagatattgtcaagta 321
Query: 304 gaagttgaaaaccaatctactcagttccatctttcacaagaatacagtggaaactcacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaagttgaaaaccaatctactcagttccatctttcacaagaatacagtggaaactcacat 261
Query: 364 gaaaatttctttagaagaaaatcatttcacttagccataaacttgaataagaaattatta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaaaatttctttagaagaaaatcatttcacttagccataaacttgaataagaaattatta 201
Query: 424 tatttttattaagtttatttttacactccatattccattctctgctcccatcctgatcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tatttttattaagtttatttttacactccatattccattctctgctcccatcctgatcca 141
Query: 484 tgctccgactgctccacataccacaccttctccccactccctctgtctccacatggatac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tgctccgactgctccacataccacaccttctccccactccctctgtctccacatggatac 81
Query: 544 tcctcaccccacaacccctgacctctaaactccctggggcttccaatctcttgagggtta 603
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 tcctcaccccacaatccctgacctctaaactccctggggcttccaatctcttgagggtta 21
Query: 604 ggagcatcatctctgaatga 623
||||||||||||||||||||
Sbjct: 20 ggagcatcatctctgaatga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
