Query= MSMg01no176_d13.b1 MSMg01no176_d13.b1 CHROMAT_FILE:
MSMg01no176_d13.b1 PHD_FILE: MSMg01no176_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:42 2005
(692 letters)
>mm_chr5_7519288_7520379
Length = 1092
Score = 1323 bits (684), Expect = 0.0
Identities = 690/692 (99%)
Strand = Plus / Minus
Query: 1 tggaagcttaagtgaaagaaggcaaagctctccaaagtaggaagatgtccttggggatac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 892 tggaagcttaagtgaaagaaggcaaaactctccaaagtaggaagatgtccttggggatac 833
Query: 61 aagggagggttttgagataagacacaatctattctgagttattccaaattgtataaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 aagggagggttttgagataagacacaatctattctgagttattccaaattgtataaaaca 773
Query: 121 gtggtttttcagactgtatcctgccctgaaaggcaccattttataaattgcatttgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 gtggtttttcagactgtatcctgccctgaaaggcaccattttataaattgcatttgactt 713
Query: 181 catttttgatggtagactaaatgtattcttggttggataaataagcactgtcatctatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 catttttgatggtagactaaatgtattcttggttggataaataagcactgtcatctatct 653
Query: 241 ctctccattcatgcaacagactgatgaatgacttatctgtattgttataaagggtgccat 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 652 ctctccattcatgcaacagactgatgaatgacttatctgtattgttagaaagggtgccat 593
Query: 301 tctataaatttattaggataaaatgagacattgggccatataaacctattaaaactgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tctataaatttattaggataaaatgagacattgggccatataaacctattaaaactgtat 533
Query: 361 cagggaagcacgtaccatagcctatcagatataccagatctggagtgggtataagactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cagggaagcacgtaccatagcctatcagatataccagatctggagtgggtataagactca 473
Query: 421 cctggatcccataaagttgaggacacctagcactggtgtggcagtgtctccacattgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cctggatcccataaagttgaggacacctagcactggtgtggcagtgtctccacattgatc 413
Query: 481 tatcatataacactcagtttatgtgtcaagaactgacaggcagaggacttttggtcagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tatcatataacactcagtttatgtgtcaagaactgacaggcagaggacttttggtcagat 353
Query: 541 gcttctctttctgctgttctctacagtgctgggatagcacatagctcaggaggtagttgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gcttctctttctgctgttctctacagtgctgggatagcacatagctcaggaggtagttgt 293
Query: 601 tacctcataaatatcggtcttttatttgtctttataaatggtttaaaataaatatttcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tacctcataaatatcggtcttttatttgtctttataaatggtttaaaataaatatttcat 233
Query: 661 tgaaataatagctctgcgattactttaggcta 692
||||||||||||||||||||||||||||||||
Sbjct: 232 tgaaataatagctctgcgattactttaggcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_d13.g1 MSMg01no176_d13.g1 CHROMAT_FILE:
MSMg01no176_d13.g1 PHD_FILE: MSMg01no176_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:47:42 2005
(384 letters)
>mm_chr5_7381243_7382025
Length = 783
Score = 719 bits (372), Expect = 0.0
Identities = 381/384 (99%), Gaps = 1/384 (0%)
Strand = Plus / Plus
Query: 1 agcagcaggatggaaaaaagtaagaagaattgagctagataagctaaactctggggataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagcaggatggaaaaaagtaagaagaattgagctagataagctaaactctggggataa 260
Query: 61 ttacagagggatcagacagatttgatcaggcatcatgacagttgtggaagaataactcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacagagggatcagacagatttgatcaggcatcatgacagttgtggaagaataactcca 320
Query: 121 aagacttctagaattaaccacatccataatcattcttgttgaaattgtctataaagggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagacttctagaattaaccacatccataatcattcttgttgaaattgtctataaagggct 380
Query: 181 actgttttatttttttccatcctttttttctcccatgacctaatacacgtgtatcttact 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 actgttttatttttttccatcctttttt-ctcccatgacctaatacacgtgtatcttact 439
Query: 241 atcttgtaaattggaatagataaggcaaactaagttaacactaaaggctttttactacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcttgtaaattggaatagataaggcaaactaagttaacactaaaggctttttactacat 499
Query: 301 ccagcacagtgacgatactgtgagaaaagtattattatggagcttataaacagtcagtag 360
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 ccagcacagtgacgatactgtgagaaaagtattaaaatggagcttataaacagtcagtag 559
Query: 361 gagtttgggaatattttatcattc 384
||||||||||||||||||||||||
Sbjct: 560 gagtttgggaatattttatcattc 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 783
Length adjustment: 9
Effective length of query: 375
Effective length of database: 774
Effective search space: 290250
Effective search space used: 290250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
