TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGTAAAATGCGTTTTAATCATATTAATCCCTCACCCATCTCCTCCC
AACTCATCTTCCTTTCCTACCCATCCAACTTTGCACCCGCCTTTTGTTTT
TCTATAAAATCTAATTTGTGCTGCTCATATATTCTAGTATATATGGCCTT
CTTCTGGAGTTTGGTGGACTTGTGAGGGGCGATTCTTTTAAGGGAAACTA
ACTCTCACTCTCCCAGCATCTCTCAAGTGCCAACAACTGCTCAGCTAAAG
TTGGGACTTCTTGTCTACCTCCCCTCTCCAGACCTGGATTGGATAGGTTC
TTCTTGATGCTCAGGGAGAACACAGCACCCTCTGGTTGGTTCCAGCATCA
GTGACTCACAGGCATAACTACAAATTTTAAAAGTGTCTTAAATAAGAGGA
TCAGAATAACTATTTGTTGTATATTATAAATACATGAATATTATTCGAAA
AGGCATAGAAGCATGCTTGAGTATACCGTTTCATTTATTTCAAAATGTAA
GAGTGCATTCCAATATATCCGTTGTCTCTTGATCTCCGACTCCCTGGTTT
AACTAAAATCACATACGGCCATGTGACAATATGTGAAATGAATCTACCCA
TCTCCCTTCCCCTTTAACCGCCTCCCCCTGACTCTCCCATTTATTTACCA
TATTTTTTCCCCCTCCCTATTCTGCTCTTACCCCATTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACAGGAATGTGAAAACATGCCA
TCTAATAAAATAAAATAGGTCCCAGTTAAAAAGTGAATATATTCAGAATA
ATGCCATATCCACCCCTATTTACCTGGCTTTAGCTTCGTGTACACTATGG
AAGATGGGAGGCCCGGAGAATCAAGTATATCTAAAGTATGTCATTCTCAC
ACACCAGGATGTCCCTTCCCTCTCTTGAGATATATTTTAGAAGTCTTTTC
TTAGATTAAATATAGCCAAATCAGAACATTAAGTTTATATGATAAGGTGT
TATATTCCCTCTTTCACCAAATTATGCACAAATGCTCTTAAGATCATGAA
TAATCTCATAATAAACAGATAAATGGTGTGTGTCCCCTGCACTGTGACCT
GCTACTTTATCTACTCTTGAATGGTAACTACCACTTAATTAAAAACCTTG
ATTCTCCCTTTTCACTAACATGCCCAGTTGTGTGTATAGATATGATGAAT
TATATCAATGTTAGATGAAATAACATTCTTTGGTGTAGTGCCAAATAACA
AATATTAAAACTACAGTTTTGTTACACATCATTGTGTTGACTTTGCCCTT
GACAATTTCATACATCTCTAAAGTTTACTTTATTACTCCACCACTCTCTC
TAGCCATTCTTCAATCCTGTAACTCTCCTACCCACATT

Query= MSMg01no177_j09.b1 MSMg01no177_j09.b1 CHROMAT_FILE:
MSMg01no177_j09.b1 PHD_FILE: MSMg01no177_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:11 2005
         (464 letters)



>mm_chr5_82254008_82254871
          Length = 864

 Score =  866 bits (448), Expect = 0.0
 Identities = 457/460 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtaaaatgcgttttaatcatattaatccctcacccatctcctcccaactcatc 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtaaaatgtgttttaatcatattaatccctcacccatctcctcccaactcatc 264

                                                                       
Query: 65  ttcctttcctacccatccaactttgcacccgccttttgtttttctataaaatctaatttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcctttcctacccatccaactttgcacccgccttttgtttttctataaaatctaatttg 324

                                                                       
Query: 125 tgctgctcatatattctagtatatatggccttcttctggagtttggtggacttgtgaggg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgctgctcatatattctagtatatatggccttcttctggagtttggtggacttgtgaggg 384

                                                                       
Query: 185 gcgattcttttaagggaaactaactctcactctcccagcatctctcaagtgccaacaact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcgattcttttaagggaaactaactctcactctcccagcatctctcaagtgccaacaact 444

                                                                       
Query: 245 gctcagctaaagttgggacttcttgtctacctcccctctccagacctggattggataggt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctcagctaaagttgggacttcttgtctacctcccctctccagacctggattggataggt 504

                                                                       
Query: 305 tcttcttgatgctcagggagaacacagcaccctctggttggttccagcatcagtgactca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcttcttgatgctcagggagaacacagcaccctctggttggttccagcatcagtgactca 564

                                                                       
Query: 365 caggcataactacaaattttaaaagtgtcttaaataagaggatcagaataactatttgtt 424
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 caggcataagtacaaattttaaaagtgtcttaaacaagaggatcagaataactatttgtt 624

                                                   
Query: 425 gtatattataaatacatgaatattattcgaaaaggcatag 464
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtatattataaatacatgaatattattcgaaaaggcatag 664


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no177_j09.g1 MSMg01no177_j09.g1 CHROMAT_FILE:
MSMg01no177_j09.g1 PHD_FILE: MSMg01no177_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:11 2005
         (576 letters)



>mm_chr5_82312067_82313042
          Length = 976

 Score = 1098 bits (568), Expect = 0.0
 Identities = 574/576 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacaggaatgtgaaaacatgccatctaataaaataaaataggtcccagttaaaaagtga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tcacaggaatgtgaaaacatgccatctaataaaataaaataggtcccagttaaaaagtga 717

                                                                       
Query: 61  atatattcagaataatgccatatccacccctatttacctggctttagcttcgtgtacact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atatattcagaataatgccatatccacccctatttacctggctttagcttcgtgtacact 657

                                                                       
Query: 121 atggaagatgggaggcccggagaatcaagtatatctaaagtatgtcattctcacacacca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atggaagatgggaggcccggagaatcaagtatatctaaagtatgtcattctcacacacca 597

                                                                       
Query: 181 ggatgtcccttccctctcttgagatatattttagaagtcttttcttagattaaatatagc 240
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 596 ggatgtcccttccctctcttgagatatattttagaaatcttttcttagattaaatatagc 537

                                                                       
Query: 241 caaatcagaacattaagtttatatgataaggtgttatattccctctttcaccaaattatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 caaatcagaacattaagtttatatgataaggtgttatattccctctttcaccaaattatg 477

                                                                       
Query: 301 cacaaatgctcttaagatcatgaataatctcataataaacagataaatggtgtgtgtccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cacaaatgctcttaagatcatgaataatctcataataaacagataaatggtgtgtgtccc 417

                                                                       
Query: 361 ctgcactgtgacctgctactttatctactcttgaatggtaactaccacttaattaaaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctgcactgtgacctgctactttatctactcttgaatggtaactaccacttaattaaaaac 357

                                                                       
Query: 421 cttgattctcccttttcactaacatgcccagttgtgtgtatagatatgatgaattatatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cttgattctcccttttcactaacatgcccagttgtgtgtatagatatgatgaattatatc 297

                                                                       
Query: 481 aatgttagatgaaataacattctttggtgtagtgccaaataacaaatattaaaactacag 540
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 296 aatgttagatgaaataacatactttggtgtagtgccaaataacaaatattaaaactacag 237

                                               
Query: 541 ttttgttacacatcattgtgttgactttgcccttga 576
           ||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttttgttacacatcattgtgttgactttgcccttga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)