CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAACCATCACTGCACTGGTAAAAGGGGAATTAAAGCCCGACGGTCC
ATCCTGCCCGCCCCTTGGACAGTCAGATCCATGGTCATACTGTGGTTATT
TTAATTTCCTGAAGTCCAGCTCTTCACCGAGGACCCAGAACGGAGCACAG
GAGCAGAGCCAGCCTGGACTACAGCTCTGACTCCAGTTCCCATCACTTCC
CATAGCACTCTGGGATTTAAGTCTCCTTTCAGCACCTGAACACCCCCTTT
CCATCTTGGAGCCAGTCCCTCCTAGCTTCTTATCTCTACCTTGCACACAT
CCACACAGGTACATTTTACCTGCCCTTCATGGCCCAGCCACTGAGCCACT
GAGCTCCTTGAAATCTTCCCCCAAAACCCCAGCTTGAAATAATCTTTTCT
CCTTGGAATTCCTGCAGTAGTTAGTGTGTATATTTCTTCTAGACGTTACC
AGTTTCTACCCAGGACACTCACTTTTAGGCATCGGTTCTTATTGACACAG
ACTACAGGACTCATCGATTCGTGCCTACTTTACTGGCCACCCTTATTACT
TCTGAAACTAGAGAATAATTTTGCCTATGTTTTATTTTATATGTTGTTAA
AACATATGTGTTCTTTGGTGTATGGCTTGTCTTACCTCAAGACATATTTT
TTTTTGTGAGATTCACCAN

CATGCGTGGTGCCGCGCCGCTGCTCCCACXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXAGTCCCTGCCTCGGTCCTTGGGCCCTTTGTTGCCCTATT
GGGTTTGGACCTTTTTGGCCCCCCCCTTGGGTGGGCTTCTTCTAAACGCG
CAAAAACCCCCCCACCCCTATTATTATTAATTACTCTTAAATTTAAAATT
TCATTTAATTTAAATTAATTTAATTAATTCCCCAAATTTAAAGGGTACAA
AAAGCAAGGAAGGGTTCCGCGGGGCACCCGCAAATGGGTGGTGAAATTTT
CCCCCCCCGACTTTTTCCCGAAACACCCGCCCCCGGGGGGCCCCCTTTTT
TTTTTTTCCCGCGGGGGCCCCCTCTCTCGGGGGGGGGGGGGGGGAAAAAA
TTCTCCCCCCCTTTTTGTCTTTTTTTCCTCCACCCCCCGGCGGGGTCTTT
TTCTTCTCCCCCCCTCCCTTCATTTCCCTCCCCCCCCCCCCCCTTTTTTT
TTTTTTTTTTTACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTTTTT
TTTTTTCCCCGCCCGGTTT

Query= MSMg01no178_c22.b1 MSMg01no178_c22.b1 CHROMAT_FILE:
MSMg01no178_c22.b1 PHD_FILE: MSMg01no178_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:55 2005
         (625 letters)



>mm_chr5_76171156_76172180
          Length = 1025

 Score = 1193 bits (617), Expect = 0.0
 Identities = 620/621 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaaccatcactgcactggtaaaaggggaattaaagcccgacggtccatcctgccc 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gaattcaaccatcactgaactggtaaaaggggaattaaagcccgacggtccatcctgccc 766

                                                                       
Query: 65  gccccttggacagtcagatccatggtcatactgtggttattttaatttcctgaagtccag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gccccttggacagtcagatccatggtcatactgtggttattttaatttcctgaagtccag 706

                                                                       
Query: 125 ctcttcaccgaggacccagaacggagcacaggagcagagccagcctggactacagctctg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ctcttcaccgaggacccagaacggagcacaggagcagagccagcctggactacagctctg 646

                                                                       
Query: 185 actccagttcccatcacttcccatagcactctgggatttaagtctcctttcagcacctga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 actccagttcccatcacttcccatagcactctgggatttaagtctcctttcagcacctga 586

                                                                       
Query: 245 acaccccctttccatcttggagccagtccctcctagcttcttatctctaccttgcacaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 acaccccctttccatcttggagccagtccctcctagcttcttatctctaccttgcacaca 526

                                                                       
Query: 305 tccacacaggtacattttacctgcccttcatggcccagccactgagccactgagctcctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tccacacaggtacattttacctgcccttcatggcccagccactgagccactgagctcctt 466

                                                                       
Query: 365 gaaatcttcccccaaaaccccagcttgaaataatcttttctccttggaattcctgcagta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaaatcttcccccaaaaccccagcttgaaataatcttttctccttggaattcctgcagta 406

                                                                       
Query: 425 gttagtgtgtatatttcttctagacgttaccagtttctacccaggacactcacttttagg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gttagtgtgtatatttcttctagacgttaccagtttctacccaggacactcacttttagg 346

                                                                       
Query: 485 catcggttcttattgacacagactacaggactcatcgattcgtgcctactttactggcca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 catcggttcttattgacacagactacaggactcatcgattcgtgcctactttactggcca 286

                                                                       
Query: 545 cccttattacttctgaaactagagaataattttgcctatgttttattttatatgttgtta 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cccttattacttctgaaactagagaataattttgcctatgttttattttatatgttgtta 226

                                
Query: 605 aaacatatgtgttctttggtg 625
           |||||||||||||||||||||
Sbjct: 225 aaacatatgtgttctttggtg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)