Query= MSMg01no179_m23.b1 MSMg01no179_m23.b1 CHROMAT_FILE:
MSMg01no179_m23.b1 PHD_FILE: MSMg01no179_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:55 2005
(352 letters)
>mm_chr5_4157682_4158432
Length = 751
Score = 629 bits (325), Expect = 0.0
Identities = 340/345 (98%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttccttgtcgcttgcaaggaaagtactgaccacttaatgtggttttaattta 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagttccttgt-gcttgcaaggaaagtactgaccacttaatgtggttttaattta 264
Query: 65 caatcttccgatggccaatgatgctgcacaattttttatatttattggacatggacattt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caatcttccgatggccaatgatgctgcacaattttttatatttattggacatggacattt 324
Query: 125 cattaacacatttattggttgggttgcttaacttcttatttagtttctttagttcattgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cattaacacatttattggttgggttgcttaacttcttatttagtttctttagttcattgt 384
Query: 185 attttctagttatgagtcctctatccaatgtacagctagaaactattttaacattatttt 244
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 385 attt-ctagttatgagtcctctatccaatgtacagctagaaactattttaagattatttt 443
Query: 245 taaatgtacttatttatttgccagggtggggagcgcatgccattatgcagagggggaggt 304
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 taaatgtacttatttatttgccagggtggggagcgcgtgccattatgcagagggggaggc 503
Query: 305 caatagataactttgtggggttggttttcgcttaccttctttatg 349
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caatagataactttgtggggttggttttcgcttaccttctttatg 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 751
Length adjustment: 9
Effective length of query: 343
Effective length of database: 742
Effective search space: 254506
Effective search space used: 254506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_m23.g1 MSMg01no179_m23.g1 CHROMAT_FILE:
MSMg01no179_m23.g1 PHD_FILE: MSMg01no179_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:55 2005
(232 letters)
>mm_chr5_4276804_4277435
Length = 632
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Minus
Query: 1 cagatggaagattatggagttatatagttatacagcttgaattagaactaaagaagagga 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 432 cagatggaagattatggagttatatagttatatagcttgaattagaactaaagaagagga 373
Query: 61 agaattttgatgggaaatgcattctagatgttgtagggaggggtggttcccaatgcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agaattttgatgggaaatgcattctagatgttgtagggaggggtggttcccaatgcctca 313
Query: 121 atgactttataataaaaagcatttgaggacatgctaggatcgtacacgaggcaagatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgactttataataaaaagcatttgaggacatgctaggatcgtacacgaggcaagatgcc 253
Query: 181 aacctaaagtcctgtttgcagattttaaatgtcagaactcaaatcttggggt 232
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aacctaaagtcctgtttgcagattttaaatgtcagaactcaaatcttggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
