Query= MSMg01no180_c05.b1 MSMg01no180_c05.b1 CHROMAT_FILE:
MSMg01no180_c05.b1 PHD_FILE: MSMg01no180_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:19 2005
(517 letters)
>mm_chr5_142794109_142795025
Length = 917
Score = 932 bits (482), Expect = 0.0
Identities = 506/514 (98%)
Strand = Plus / Plus
Query: 4 ggaattctcttgccttccttcaccttccatcttgccttagaagtgctgggattccaggta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttgccttccttcaccttccatcttgccttagaagtgctgggattccaggta 263
Query: 64 tgcactaccatgttggctttacatgagctctgcccactgagccatcttcctggcctaggg 123
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgcactatcatgttgactttacatgagctctgcccactgagccatcttcctggcctaggg 323
Query: 124 acttctctctaagtagcatcatttggacatttgttcctttacgcagatgtccttgagcct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acttctctctaagtagcatcatttggacatttgttcctttacgcagatgtccttgagcct 383
Query: 184 ggctaagctcaagatcgcccacaaatgcatcctcctcgatgtatttaaatcccagtaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggctaagctcaagatcgcccacaaatgcatcctcctcgatgtatttaaatcccagtaata 443
Query: 244 cagtcgcccttgggatgcctggagcttcagttctgggaccctcagcaaacactgtgtgga 303
||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||
Sbjct: 444 cagtcgcccttgggatgcctggagcttcagttctgggaccctcggcgaacattgtgtgga 503
Query: 304 tacgtaggccctgtatagatgtgatggtgcttgtagagaacccatgtccatcttcccacg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tacgtaggccctgtatagatgtgatggtgcttgtagagaacccatgtccatcttcccacg 563
Query: 364 cacttgcagtattctttatattacttagactaatgcaaggtcaagtctgtgtgaacggtt 423
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 564 cacttgcagtattctttatattacttagactaatgcaaggtcaagtctgtgtaaacggtt 623
Query: 424 gctagacagcattgtttagggactagcaacagcagcaacaaaaagatggttggctcagac 483
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 624 gctagacagcattgtttagggactagcaacagcagtaacaaaaaaatggttggctcagac 683
Query: 484 tctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 517
||||||||||||||||||||||||||||||||||
Sbjct: 684 tctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 717
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 485 ctgtgtgtgtgtgtgtgtgtgtgtgtgt 512
||||||||||||||||||||||||||||
Sbjct: 25 ctgtgtgtgtgtgtgtgtgtgtgtgtgt 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 2
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_c05.g1 MSMg01no180_c05.g1 CHROMAT_FILE:
MSMg01no180_c05.g1 PHD_FILE: MSMg01no180_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:19 2005
(296 letters)
>mm_chr5_142851099_142851794
Length = 696
Score = 571 bits (295), Expect = e-167
Identities = 295/295 (100%)
Strand = Plus / Minus
Query: 1 caggttagacagagacacatagtgagagcctgattcaaaaacaaaatatcatacatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 caggttagacagagacacatagtgagagcctgattcaaaaacaaaatatcatacatgcaa 314
Query: 61 catatgttaatcctctccactccaggtctcctacagctccccctacccctccaacaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 catatgttaatcctctccactccaggtctcctacagctccccctacccctccaacaaccc 254
Query: 121 cctcccacctctacccactcctttatgccctttccttatattttgtaacccactgtggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 cctcccacctctacccactcctttatgccctttccttatattttgtaacccactgtggct 194
Query: 181 atttgaatatgaatggtccccataggttcatatgtttgaatgctcagtcatctgggaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atttgaatatgaatggtccccataggttcatatgtttgaatgctcagtcatctgggaatg 134
Query: 241 gcactgcttgggaaggattaggaggcgtggccttgctggaggaagcctgtcattg 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gcactgcttgggaaggattaggaggcgtggccttgctggaggaagcctgtcattg 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
