Query= MSMg01no181_l06.b1 MSMg01no181_l06.b1 CHROMAT_FILE:
MSMg01no181_l06.b1 PHD_FILE: MSMg01no181_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:14 2005
(179 letters)
>mm_chr5_102228284_102228862
Length = 579
Score = 331 bits (171), Expect = 2e-95
Identities = 177/179 (98%)
Strand = Plus / Plus
Query: 1 taggcagctgaagggggtgtggtcacgaagagatggcagtgattggccccgctgaaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 taggcagctgaagggggtgtggtcacgaagagatggcagtgattggccctgctgaaaggt 260
Query: 61 tacccttaaggttctgtagtgtgaggcagagggctgttggctgtcagtgtgcacacgtgc 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccccttaaggttctgtagtgtgaggcagagggctgttggctgtcagtgtgcacacgtgc 320
Query: 121 caccatatcttgcttcctctcgccagacaagcttgatttctttgaagacctgattccaa 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccatatcttgcttcctctcgccagacaagcttgatttctttgaagacctgattccaa 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no181_l06.g1 MSMg01no181_l06.g1 CHROMAT_FILE:
MSMg01no181_l06.g1 PHD_FILE: MSMg01no181_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:14 2005
(318 letters)
>mm_chr5_102371933_102372648
Length = 716
Score = 572 bits (296), Expect = e-168
Identities = 309/316 (97%), Gaps = 6/316 (1%)
Strand = Plus / Minus
Query: 5 gaattctctgctcggcctctctgattagaatcagtgagagcgatgggtttaactgggttt 64
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 516 gaattctctgctcggcctctctgattagaatcagtgagagcgatggggttaactgggttt 457
Query: 65 gccattttcatttg--ccccatatttgttacataattagctcctcccacactaaaataaa 122
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gccattttcatttgga----atatttgttacataattagctcctcccacactaaaataaa 401
Query: 123 aatctgttaacatcaatttgaacatattttgggcaggtgctgggcatgtgttatttcaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aatctgttaacatcaatttgaacatattttgggcaggtgctgggcatgtgttatttcaaa 341
Query: 183 gggtatgttattagcatgtgtgatagtggagaaagtaaatgtgaaagacacaataaggag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gggtatgttattagcatgtgtgatagtggagaaagtaaatgtgaaagacacaataaggag 281
Query: 243 aattaataattcaagtggaactggccagaaaacaatgcttttatgatttgaatctttgaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aattaataattcaagtggaactggccagaaaacaatgcttttatgatttgaatctttgaa 221
Query: 303 cctattttctagggga 318
||||||||||||||||
Sbjct: 220 cctattttctagggga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 716
Length adjustment: 9
Effective length of query: 309
Effective length of database: 707
Effective search space: 218463
Effective search space used: 218463
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
