Query= MSMg01no183_d22.b1 MSMg01no183_d22.b1 CHROMAT_FILE:
MSMg01no183_d22.b1 PHD_FILE: MSMg01no183_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:12 2005
(667 letters)
>mm_chr5_21697651_21698717
Length = 1067
Score = 1178 bits (609), Expect = 0.0
Identities = 641/657 (97%), Gaps = 10/657 (1%)
Strand = Plus / Minus
Query: 21 aaatacacagtagagcacactgtttaaaatagataggaggattgtaacgtgggaaaatgg 80
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1067 aaatacacagtagagcacactgtttaaaatagataggaggattgtaacatgggaaaatgg 1008
Query: 81 gatggaactcaattgctcaatgctgataattgctcacctctagaagtttgcaacacaaat 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 gatggaactcaattgctcaatgctgataattgctcacctctagaagtttgcaacacaaat 948
Query: 141 agttgtcatttgggtgtttattatgcatgtacacccatgggtaaagagtcccagagacat 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 agttgtcatttgggtgtttattatgcatgtacacccatgggtaaagagtcccagagacat 888
Query: 201 tatgtatt-at---------accctttttcctgttaataaagcactttcatatctgctat 250
|||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 tatgtattaattctttacacaccctttttcctgttaataaagcactttcatatctgctat 828
Query: 251 catatatgctactccttatagagtcctgtggagtaggaaagccagctgctctccagcttc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 827 catatatgctactccttatagagtcctgtggagtaggaaagccagctgctctctagctcc 768
Query: 311 attcattcagttgttgatcgaaagaaagaagagctggctttaattttgccatcatgtttg 370
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 attcattcagttgttgattgaaagaaagaagagctggctttaattttgccatcatgtttg 708
Query: 371 atcttgcctttccacactacctgcaggaaaagaaatattgtctgctcatataatatatca 430
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 707 atcttgcctttccacactacctgcaggaaaagaaatattatctgctcatataatatatca 648
Query: 431 aattctagttagacatttaagtaatttctgcaaagcagttactagtagacttcctgatca 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aattctagttagacatttaagtaatttctgcaaagcagttactagtagacttcctgatca 588
Query: 491 aaattaaacatcatacattcatggtaatttatccatttctccaaattagaagtagttggc 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aaattaaacatcatacattcatggtaatttatccatttctccaaattagaagtagttggc 528
Query: 551 ttagtgtgatactgagcaagagaatatagagaaaaatgcatcccagaggctaactcacac 610
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttagtgtgatgctgagcaagagaatatagagaaaaatgcatcccagaggctaactcacac 468
Query: 611 ttgatagcatggacaaggtgtcttcaaactcacatgtgcagcttgtacttaagattt 667
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttgatagcatggacaaggtgtcttcaaactcacatgtgcagcttgtacttaagattt 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_d22.g1 MSMg01no183_d22.g1 CHROMAT_FILE:
MSMg01no183_d22.g1 PHD_FILE: MSMg01no183_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:12 2005
(315 letters)
>mm_chr5_21540984_21541699
Length = 716
Score = 545 bits (282), Expect = e-159
Identities = 291/294 (98%), Gaps = 1/294 (0%)
Strand = Plus / Plus
Query: 1 gaaagctccatcaatcacagtcccacgctacttacttccacgctcgccttgggatgtga- 59
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 gaaagctccatcaatcacagtcccacgctacttacatccacgctcgccttgggatgtgaa 260
Query: 60 gcgggcagcaagcgggacacctgtctccatcagggctcagctaagctccgggagaagtgc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcgggcagcaagcgggacacctgtctccatcagggctcagctaagctccgggagaagtgc 320
Query: 120 ctgccacagatgcatgctggagcgtctgtggaggtttccctcagccagtgaagagaaaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgccacagatgcatgctggagcgtctgtggaggtttccctcagccagtgaagagaaaga 380
Query: 180 aaaactttactcatttgtaggttaagtggctgtatgggtaacaaagtgcctaaaatgcca 239
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aaaactttactcatttgtaggttaagtggctgtatgggtaacaaagtgtctaaaatgcca 440
Query: 240 atgcccaaggctggctttcctgagagattgctttacgtgtgtgtgtgtgtgtgt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgcccaaggctggctttcctgagagattgctttacgtgtgtgtgtgtgtgtgt 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 716
Length adjustment: 9
Effective length of query: 306
Effective length of database: 707
Effective search space: 216342
Effective search space used: 216342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
