CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTACTTATTCAGTAGCTCAGAACATGACTGCATTCGCAAACAGGAAT
CATTAAGGAAAATACTATGGTAAAACTAAAATTTTTAATCTCAATCCTTA
TTCAATTCAAATATAATTTGAAAATGAACATTAAGATACTGAAAATGAGG
TTAAAGAAGTCACTCAGTGCTGAGAAATATGTACTGCTGATCCAAAGGAC
CAAAGTTTAGTTTCCAAAACTAACAGTGAGCTACTTACAACCATTTATAA
TTCCAGTTCTAGGAGCATCTGAAGTCTTTGTCTTCCAGGATACCTCCACT
TATGAGCACACATTCACAACGACACACAGATTGATAGACCAACAGACAGT
GACAAACGCACACACTCAGAGACACACACAGACACACATATACACACAGA
CACATACACTTTTTAAATGTAAACTTACTTTTTTAAGCATATCATATCTG
AAGACTATATTCACATTAAAGAATATACATAATTTTATTAAAAAATCAAT
ATTTAAAAATATACTGAAACAGACACCAAGAATAAGCAAGCATACAAAAG
CGTTGTTGGGATCCAAGGGGAACATGGGCATGAACGATGCCCATGAAAAT
CTTGTACTTCTCTCTTCTGNCACTGTGAATTGAATTCCTCTCACAATAGT
CTCTATA

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAATACATGCTTACTGACAGGAGCATGATA
TAGCTGTCTCCTGAGAGGCTCTGCCAGAGAATGACAAATACAGAGGTGGA
TGCTCTCAGCCAACCATTGGTCTGAGTACAGGGTTTGAATGGAGGAGCTA
AAGAAAGAACTGAAGGAGCTGAAGGGGTTTGCAACCCCATAGGAGGAAAA
ACAATATGAACCAACCAGTATCCCCAGATCTCCTAGGGACTAAACCACCA
ATCAAGGTACACATGGGGGACTCATGGCTCGAGCTACATATGTAGCAGAG
GATGGCCTTGTGTTTCATCACCGCCCACGGAAAGACCCTTGTCCTATGAA
AGCTAGACGCCCCAGCATAGAGGAATTCCAGGGCAGGAAAGCAGGAATGT
GTGGGTTGGTGAACAGGGGAGTGGGAATGGGATAAGGGGTTCCCCTCTTT
TTTTTTCTTTTTCTATTTTTTTTACCCCCCCCCCCCCCTCCCCCTTTTTC
TCCCTTATTTTTATCTCTAACCCTTTTTTTACCCCCATTTTTTTCTTATT
AAACCCTCTCCCTTTCACCCTATCTATATTTTTCTCTCGCACCCCCCCCA
CTCCTCTTCGCCCCCTTTTCCCTTTTTCCCCCTCCCTTCTCCTCTTCTTC
CTTTCCCCACCCCTATTTTCACCCCACTCCCTTGTTTTACACTTGTTCCC
ACCTTTTCTCTCCCTTCTATATCATATGACACACTTGACN

Query= MSMg01no183_h23.b1 MSMg01no183_h23.b1 CHROMAT_FILE:
MSMg01no183_h23.b1 PHD_FILE: MSMg01no183_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:32 2005
         (663 letters)



>mm_chr5_71184003_71185065
          Length = 1063

 Score = 1237 bits (640), Expect = 0.0
 Identities = 655/660 (99%), Gaps = 2/660 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctacttattcagtagctcagaacatgactgcattcgcaaacaggaatcattaagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacttattcagtagctcagaacatgactgcattcgcaaacaggaatcattaagg 264

                                                                       
Query: 65  aaaatactatggtaaaactaaaatttttaatctcaatccttattcaattcaaatataatt 124
           |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaatactatgggaaaaataaaatttttaatctcaatccttattcaattcaaatataatt 324

                                                                       
Query: 125 tgaaaatgaacattaagatactgaaaatgaggttaaagaagtcactcagtgctgagaaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaaaatgaacattaagatactgaaaatgaggttaaagaagtcactcagtgctgagaaat 384

                                                                       
Query: 185 atgtactgctgatccaaaggaccaaagtttagtttccaaaactaacagtgagctacttac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgtactgctgatccaaaggaccaaagtttagtttccaaaactaacagtgagctacttac 444

                                                                       
Query: 245 aaccatttataattccagttctaggagcatctgaagtctttgtcttccaggatacctcca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaccatttataattccagttctaggagcatctgaagtctttgtcttccaggatacctcca 504

                                                                       
Query: 305 cttatgagcacacattcacaacgacacacagattgatagaccaacagacagtgacaaacg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 505 cttatgagcacacattcacaacgacacacagattgatagaccaacagacagtgacaaaca 564

                                                                       
Query: 365 cacacactcagagacacacacagacacacatatacacacagacacatacactttttaaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacacactcagagacacacacagacacacatatacacacagacacatacactttttaaat 624

                                                                       
Query: 425 gtaaacttacttttttaagcatatcatatctgaagactatattcacattaaagaatatac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtaaacttacttttttaagcatatcatatctgaagactatattcacattaaagaatatac 684

                                                                       
Query: 485 ataattttattaaaaaatcaatatttaaaaatatactgaaacagacaccaagaataagca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ataattttattaaaaaatcaatatttaaaaatatactgaaacagacaccaagaataagca 744

                                                                       
Query: 545 agcatacaaaagcgttgttgggatccaaggggaacatgggcatgaacgatgcccatgaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agcatacaaaagcgttgttgggatccaaggggaacatgggcatgaacgatgcccatgaaa 804

                                                                       
Query: 605 atcttgtacttctctcttctgnca-ctgtgaattgaattcctctcacaatagtctctata 663
           ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 805 atcttgtacttctctcttctg-caactgtgaattgaattcctctcacaatagtctctata 863


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)