Query= MSMg01no183_i16.b1 MSMg01no183_i16.b1 CHROMAT_FILE:
MSMg01no183_i16.b1 PHD_FILE: MSMg01no183_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:35 2005
(630 letters)
>mm_chr5_76643703_76644732
Length = 1030
Score = 1180 bits (610), Expect = 0.0
Identities = 622/626 (99%)
Strand = Plus / Minus
Query: 5 gaattcattgtcttgtctcagtagcagttttgaaaccttagtacatttttagcagcagtg 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 gaattcattgtctggtttcagtagcagttttgaaaccttagtacatttttagcagcagtg 771
Query: 65 tcattctcaagtccccatgaggactgctgcgtctcttgggctgcctgacagcgtcacagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tcattctcaagtccccatgaggactgctgcgtctcttgggctgcctgacagcgtcacagc 711
Query: 125 tgggaatgggatcccaaaatcgtttcctgtttgcatcttcctctaaagctgagtaactct 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 710 tgggaatgggatcccaaaatcgtttcctgtttgcatcttcctctaaagctaagtaactct 651
Query: 185 tttaggaattaccagtaaatacttgctcagagacaagggacaagttgtctttaattttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tttaggaattaccagtaaatacttgctcagagacaagggacaagttgtctttaattttca 591
Query: 245 ttgcagcactagaataatgtaactcacatgctttttaaacattaagatttcatttggcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttgcagcactagaataatgtaactcacatgctttttaaacattaagatttcatttggcaa 531
Query: 305 tatcattctctacaggtaataaactccaacaaagctacatacattttaaaaggcattttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tatcattctctacaggtaataaactccaacaaagctacatacattttaaaaggcattttt 471
Query: 365 ttagattttatggtactaataatgagtttttcaattaaagaacaaaagatcagtaggata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttagattttatggtactaataatgagtttttcaattaaagaacaaaagatcagtaggata 411
Query: 425 tagaatatcaagtattactgagaaaagggaggataagtgtggcacattagaattgacctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tagaatatcaagtattactgagaaaagggaggataagtgtggcacattagaattgacctt 351
Query: 485 aaaaggaaagtatgtgatggtgaggtgctaaaccggtttcagcagtgcagataacctaag 544
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 350 aaaaggaaagtatgtgatggtgaggtgctaaactggtttcagcagtgcagataacctaag 291
Query: 545 gcagagttgctagatcagggcttggggaactcggagtcagctatctgtctctagctttgc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcagagttgctagatcagggcttggggaactcggagtcagctatctgtctctagctttgc 231
Query: 605 tctcatcatcagtaagtgtgtctttg 630
||||||||||||||||||||||||||
Sbjct: 230 tctcatcatcagtaagtgtgtctttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_i16.g1 MSMg01no183_i16.g1 CHROMAT_FILE:
MSMg01no183_i16.g1 PHD_FILE: MSMg01no183_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:35 2005
(290 letters)
>mm_chr5_76451848_76452538
Length = 691
Score = 511 bits (264), Expect = e-149
Identities = 283/290 (97%), Gaps = 3/290 (1%)
Strand = Plus / Plus
Query: 2 gttcctttggcagctggtgttaaagagcactgaagagcacacccaggctagaggccaggc 61
|||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||
Sbjct: 202 gttcctttggcagctggtgttagagagcactaaagaacacacccaggctagaggccaggc 261
Query: 62 tctt--gtctgctgcacctgaggactccccaccagtacagtttcaaccagctctaaattc 119
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 262 tcttttgtctgctgcacctgaggactccc-accagtacagtttcaaccagctctaaattc 320
Query: 120 ctcgggtgttgaagatttcattgtggataaagtgcctttgaacatatcagctcataaaca 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgggtgttgaagatttcattgtggataaagtgcctttgaacatatcagctcataaaca 380
Query: 180 cctcgtttctgttctggctcaagatgaaacagtggttatccacaggaataactagctaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcgtttctgttctggctcaagatgaaacagtggttatccacaggaataactagctaat 440
Query: 240 tagcagcatatgttctcccacttatccccgaggcttattttaaataatat 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcagcatatgttctcccacttatccccgaggcttattttaaataatat 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
