Query= MSMg01no185_a11.b1 MSMg01no185_a11.b1 CHROMAT_FILE:
MSMg01no185_a11.b1 PHD_FILE: MSMg01no185_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:38 2005
(294 letters)
>mm_chr5_131963012_131963705
Length = 694
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Plus
Query: 1 gagtctgaggttacagactctaaggaatggatcgatgcgtgggacaacctcggaagtgtt 60
||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 201 gagtctgaggttacagactctgaggaatggatcgatgcatgggacaacctcggaagtgtt 260
Query: 61 attgtctccctcaacacagtaattagcttattagcattcagaactggggtgacctaatgc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtctccctcaacacggtaattagcttattagcattcagaactggggtgacctaatgc 320
Query: 121 tcctggctctctcataccgcaaaatgtaataagcatattataagctaggtgcttagacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctggctctctcataccgcaaaatgtaataagcatattataagctaggtgcttagacaa 380
Query: 181 attatgggttacagaactcggtcttcccaggaaaacagcctgcatatgtactgtatcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attatgggttacagaactcggtcttcccaggaaaacagcctgcatatgtactgtatcact 440
Query: 241 tgtgcctgcccaagtgtcaatcaggatctggcctgttgaaggctgacattc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgcctgcccaagtgtcaatcaggatctggcctgttgaaggctgacattc 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_a11.g1 MSMg01no185_a11.g1 CHROMAT_FILE:
MSMg01no185_a11.g1 PHD_FILE: MSMg01no185_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:38 2005
(214 letters)
>mm_chr5_132123103_132123717
Length = 615
Score = 373 bits (193), Expect = e-108
Identities = 207/215 (96%), Gaps = 7/215 (3%)
Strand = Plus / Minus
Query: 1 gtcagccctggaaactgcacaggcctctgctcccagctcacggggcagtcacatgctggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtcagccctggaaactgcacaggcctctgctcccagctcacggggcagtcacat------ 434
Query: 61 gctggggctggggctgggagtgaaatagcagcttgcagagctt-cccccctcctctcctt 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 433 gctggggctggggctgggagtgaaatagcagcttgcagagcttccccccctcctctcctt 374
Query: 120 gcagagcagagaggtgggatttagaggggacctgacctgttaaggactgagagggaagct 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gcggagcagagaggtgggatttagaggggacctgacctgttaaggactgagagggaagct 314
Query: 180 aatgaactgagtctgataccgagtgactttggggt 214
|||||||||||||||||||||||||||||||||||
Sbjct: 313 aatgaactgagtctgataccgagtgactttggggt 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 615
Length adjustment: 9
Effective length of query: 205
Effective length of database: 606
Effective search space: 124230
Effective search space used: 124230
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
