Query= MSMg01no185_b13.b1 MSMg01no185_b13.b1 CHROMAT_FILE:
MSMg01no185_b13.b1 PHD_FILE: MSMg01no185_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:43 2005
(670 letters)
>mm_chr5_67820997_67822066
Length = 1070
Score = 1011 bits (523), Expect = 0.0
Identities = 532/535 (99%)
Strand = Plus / Minus
Query: 5 gaattcactcacaatctcaagctcttttgtaacaggcattgatccaagcttggggacaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gaattcactcacaatctcaagctcttttgtaacaggcattgatccaagcttggggacaca 476
Query: 65 gcctgtatgtactaaatgtctactcttgggccccatctcccaatcctgttgcactgggga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcctgtatgtactaaatgtctactcttgggccccatctcccaatcctgttgcactgggga 416
Query: 125 ctacgcttccaacccaattaccgcaaccattcattagaatattcacttttgtagaaatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctacgcttccaacccaattaccgcaaccattcattagaatattcacttttgtagaaatgg 356
Query: 185 ctatttggggatataaaatagaggtggttcctttagtcagtaaaacatgaagaaagtatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ctatttggggatataaaatagaggtggttcctttagtcagtaaaacatgaagaaagtatc 296
Query: 245 gttcctggtctctcaaggtgtttgagtggcaaggttaacataaatttaaaatatgtacat 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gttcccggtctctcaaggtgtttgagtggcaaggttaacataaatttaaaatatgtacat 236
Query: 305 aagggctaaagatgtggccacacttgttgaaccagaggccttgggttcaattcccagcac 364
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aagggctaaagaggtggccacacttgttgaaccagaggccttgggttcaattcccagcac 176
Query: 365 ctacatggtggctcacaactgtgctaccagttccagatcctccagcaccaggtatccatg 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ccacatggtggctcacaactgtgctaccagttccagatcctccagcaccaggtatccatg 116
Query: 425 cagtgcatatatacacatgcaggcaacacactcatacaaataaaattaataaatctaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 cagtgcatatatacacatgcaggcaacacactcatacaaataaaattaataaatctaaga 56
Query: 485 gaaagctctgccccagatacaggaaatcattttcttaccaaaggactgaaggttt 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 gaaagctctgccccagatacaggaaatcattttcttaccaaaggactgaaggttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_b13.g1 MSMg01no185_b13.g1 CHROMAT_FILE:
MSMg01no185_b13.g1 PHD_FILE: MSMg01no185_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:43 2005
(288 letters)
>mm_chr5_67703293_67703979
Length = 687
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 tattggcttcattgagtcccatgtgggcccatgtagtttctagcctataagcagttttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattggcttcattgagtcccatgtgggcccatgtagtttctagcctataagcagttttca 260
Query: 61 gttgtgtattaatgctgaaggtatgctgaaagctgctgatacctgaaataccattaacat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gttgtgtattaatgctgaaggtatgctgaaagctgctgatacctaaaataccattaacat 320
Query: 121 tcaagactaagggatgtttccagacagctagcaagggtaaagtattagaaggatttgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaagactaagggatgtttccagacagctagcaagggtaaagtattagaaggatttgaag 380
Query: 181 agacctctactggccaagaaataaggccatttgagcattactcaactcgatgactggaat 240
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 agacctctactggcca-gaaataaggccatttgagcattactcaactcaatgactggaat 439
Query: 241 ggattgaaatatacagcaaatcatactgaaatctgcacttgtaatg 286
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 440 ggattgaaatatacagcaaatcgtactgaaatctgcacttgtaatg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
