Query= MSMg01no185_b23.b1 MSMg01no185_b23.b1 CHROMAT_FILE:
MSMg01no185_b23.b1 PHD_FILE: MSMg01no185_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(320 letters)
>mm_chr5_39163056_39163772
Length = 717
Score = 547 bits (283), Expect = e-160
Identities = 307/317 (96%), Gaps = 5/317 (1%)
Strand = Plus / Plus
Query: 5 gaattctgcttcacagatggggcaaccctagaactctgttttgaactcttaatattttat 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctgcttcacagatggggcaaccctagaactctgttttggactcttaatattttat 264
Query: 65 agtccaggg-ttgaaaacaataaaaaggtataaagttgaatttgttgctttatagtcctg 123
||||||||| ||||||| |||||||| |||||||||||||||||| ||||||||| |
Sbjct: 265 agtccagggtttgaaaa----aaaaaggtctaaagttgaatttgttgccttatagtcccg 320
Query: 124 actgtatctgtggctttccatagtatattcctgatatatggtcggtaaataaagccatag 183
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggatctgtggctttccatagtatattcctgatatatggtcggtaaataaagccatag 380
Query: 184 attttaataaggcagaggatataattattcctaagggtgcgatttaaaatatttatgttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttaataaggcagaggatataattattcctaagggtgcgatttaaaatatttatgttg 440
Query: 244 taatttgtctagttattagggtccagttcaatttacttttgggttagatggtcagatgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatttgtctagttattagggtccagttcaatttacttttgggttagatggtcagatgca 500
Query: 304 tactcctatgggtaagt 320
|||||||||||||||||
Sbjct: 501 tactcctatgggtaagt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 717
Length adjustment: 9
Effective length of query: 311
Effective length of database: 708
Effective search space: 220188
Effective search space used: 220188
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_b23.g1 MSMg01no185_b23.g1 CHROMAT_FILE:
MSMg01no185_b23.g1 PHD_FILE: MSMg01no185_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(292 letters)
>mm_chr5_39261005_39261696
Length = 692
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 caaagtcgggtttcaaatgtgcttcaagtcacagatgaagggctgagctcctccgcaccc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 492 caaagtcgggtttcaaatgtgcttcaagtcacagacgaagggctgagctcctcagcaccc 433
Query: 61 acactgtgcagtttgtatacaagacagatatggctccagagggctgtcgcggaaaaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acactgtgcagtttgtatacaagacagatatggctccagagggctgtcgcggaaaaggaa 373
Query: 121 aatgacagaattgctcagtattgcaaaatctgggtcatttggattgccgccgtacaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aatgacagaattgctcagtattgcaaaatctgggtcatttggattgccgccgtacaatgg 313
Query: 181 aatcttacttaaatagaatgccttgtacgcagctctggtatgcagcaaatggcactgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aatcttacttaaatagaatgccttgtacgcagctctggtatgcagcaaatggcactgttc 253
Query: 241 ttgttatctattattgttatgagttgcattattcctagtccataaatgatta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttgttatctattattgttatgagttgcattattcctagtccataaatgatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
