Query= MSMg01no186_e22.b1 MSMg01no186_e22.b1 CHROMAT_FILE:
MSMg01no186_e22.b1 PHD_FILE: MSMg01no186_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:15 2005
(318 letters)
>mm_chr5_91146217_91146934
Length = 718
Score = 549 bits (284), Expect = e-161
Identities = 309/324 (95%), Gaps = 11/324 (3%)
Strand = Plus / Minus
Query: 5 gaattcataaggctgtccatcaccttgtggatgtataatgaaaatgcggtccatagtcac 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 684 gaattcataaggctgtccatcaccttgtggatgtataatgaaaatgcggtccgtagtcac 625
Query: 65 aatgggattttgttcatatatataaagaaaaat-----------gaaaatggatggaatt 113
||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 624 aatgggattttgttcatatatataaagaaaaatgaaaacgtcaggaaaatggatggaatt 565
Query: 114 ggaaatgccagggaagtaagccaggctcagagactgcataaacatttacctaaataaaag 173
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggaaatgtcagggaagtaagccaggctcagagactgcataaacatttacctaaataaaag 505
Query: 174 gggaagagaaaacataggcagtgcctgcctatgcttgacctagaaattcaatacaattag 233
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gggaaaagaaaacataggcagtgcctgcctatgcttgacctagaaattcaatacaattag 445
Query: 234 tctaaatttaaaaatacttgaatattcctcacctacttcttctcaagatataatcctaga 293
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 444 tctaaatttaaaaatacttgaatattcctcacctacttcttctcaagatacaatcctaga 385
Query: 294 ctatctgtttctgtctgccaaatt 317
||||||||||||||||||||||||
Sbjct: 384 ctatctgtttctgtctgccaaatt 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_e22.g1 MSMg01no186_e22.g1 CHROMAT_FILE:
MSMg01no186_e22.g1 PHD_FILE: MSMg01no186_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:15 2005
(285 letters)
>mm_chr5_91010663_91011345
Length = 683
Score = 530 bits (274), Expect = e-155
Identities = 281/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 ttaatcttgcccatgaccctggcatattgctgtgaccctggataaacactaacaacatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatcttgcccatgaccctggcatattgctgtgaccctggataaacactaacaacatca 260
Query: 61 tcttttttttttttttttttagaaagagatgttccaaaaagtgatacttgaaagccgtga 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctttttttttttttttt--agaaagagatgttccaaaaagtgatacttgaaagccgtga 318
Query: 121 ccgagttaaaacttactgtgacttacagaagcagctgggcagtagcagcttccaggacag 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccaagttaaaacttactgtgacttacagaagcagctgggcagtagcagcttccaggacag 378
Query: 181 gtgtgctcgccagacaccccagactcatcctcatcagagactgttggttagtccctgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtgtgctcgccagacaccccagactcatcctcatcagagactgttggttagtccctgatg 438
Query: 241 ctaagattggctcagagtgttcatccacccattaattgagtatt 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctaagattggctcagagtgttcatccacccattaattgagtatt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 683
Length adjustment: 9
Effective length of query: 276
Effective length of database: 674
Effective search space: 186024
Effective search space used: 186024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
