CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTTAGATTTGTGCCCCATTTTTAATGGGGTTATTTGACTTTC
TGGATTCCACCTTCTTGAGTTCTTTATATATATTGGATATGAGTCCCCTA
TCTGATTTAGGATTGGTAAAGATACTTTCCCAGTCTGTTGGTGGCCTTTT
TGTCTTACTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTA
GGTCCCATTTGTCAATTCCTGATCTTAAAGCACAAGCCATTGCTCTTCTA
TTCAGGAATTTTTCCCCTGTGCCTGTAGCTTCGAGGCTTTTCCCAACTTT
CTCCTCTATAACTCTCACTGCCTCCGGTTTTATGTGGAGTTCCTTGATCC
ACTTAGATTTGACCTTAGTTCAAGGAGATAAGAATGGATTAATTCACATT
TTTCTACATGATATCCACCAGGTGTGCCAGCGCCTTTTGTTGAAAATGCT
CTCTTTTTTTCTACTGGATGGTTTTAGCTCCCTTTTCAAAGATCAAGTGA
CCATAGGTGTGTGGGTTCATTCCTGGGTCTTCAATTCTATTCTATTGGTC
TACCTGTCTGTCACTGTACAAGTACCATGCTGGTTTTATCACAATTTCTC
TGGGCTACAGCTTGATGTCACGCATGGTGATTCTACCAGAGATTTCGTAT
CATTTAGAACAGTN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATCCTCGGTTTCTTTATTTGTTAGAG
CTGTCGTGTGTAAGGTGACAGCCATTAAAGAAAACTGCAGCTTAAAAGGA
TGCCTCTACCAGTGCATATAATGAGTCCTCGATTTTACTTGCTTAGAATC
ATTCAATTGAAATGAGGCATAAAGACTTCTCTATTAAAGTTTATGCAATG
CTTTGGGGCACCTCAAATTATACTAAATTATAAGATATTGAAGTTAAAAT
ATTTCAGCTTAGCATTGCATTATAAATCTTGTACAAAGCCATAAAACTCC
TTAAAGTAATTCTCTTTGGGAAAGTAAAGATTTTCCCCTAGCTAAACAGG
AAATGATATTTTTAAAAATCATAGTTGGATAAGAGAAATAATTGAGAAGG
AAGCACAGAGATGAATCAAAATGACATATTTCATATATTTCCCTGTTTTT
TCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTCCCC
CTTCATCCTACCCCTTCTTTTTTCACCTTTTTCCCCTTTACTCCTTTCCC
CCCTTTTATTCCCTTTACCTTCAAAACCCCCATCCCACATTACACATTTT
TTTTCACTCTTCTTTTCCCCTTCCCCCCCTGCCATACTCATTTTTTCTTA
ATTCCCACCACTTCGCCCTTCCTCCACAATTTTTTTTTTTTTCCTCCT

Query= MSMg01no189_d15.g1 MSMg01no189_d15.g1 CHROMAT_FILE:
MSMg01no189_d15.g1 PHD_FILE: MSMg01no189_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:09 2005
         (468 letters)



>mm_chr5_60619737_60620604
          Length = 868

 Score =  799 bits (413), Expect = 0.0
 Identities = 453/471 (96%), Gaps = 11/471 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   atcctcggtttctttatttgttagagctgtcgtgtgtaaggtgacagccattaaagaaaa 60
           |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 605 atcctcggcttctttatttgttagagctgtcgtgtgtaaggtgacaggaattaaagaaaa 546

                                                                       
Query: 61  ctgcagcttaaaaggatgcctctaccagtgcatataatgagtcctcgattttacttgctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctgcagcttaaaaggatgcctctaccagtgcatataatgagtcctcgattttacttgctt 486

                                                                       
Query: 121 agaatcattcaattgaaatgaggcataaagacttctctattaaagtttatgcaatgcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 agaatcattcaattgaaatgaggcataaagacttctctattaaagtttatgcaatgcttt 426

                                                                       
Query: 181 ggggcacctcaaattatactaaattataagatattgaagttaaaatatttcagcttagca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggggcacctcaaattatactaaattataagatattgaagttaaaatatttcagcttagca 366

                                                                       
Query: 241 ttgcattataaatcttgtacaaagccataaaactccttaaagtaattctctttgggaaag 300
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttacattataaatcttgtacaaagccataaaactccttaaagtaattctctttgggaaag 306

                                                                       
Query: 301 taaagattttcccctagctaaacaggaaatgatatttttaaaaatcatagttggataaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 taaagattttcccctagctaaacaggaaatgatatttttaaaaatcatagttggataaga 246

                                                                       
Query: 361 gaaataattgagaa-ggaagcacagagatgaatcaaaatgacatatttcatatatttccc 419
           |||||||||||||| ||| ||||||| |||||||||||||||||||       |||||||
Sbjct: 245 gaaataattgagaaagga-gcacagaaatgaatcaaaatgacatat-------atttccc 194

                                                              
Query: 420 tgtttttt--ctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 468
            |||||||  |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 193 cgttttttttctttgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtg 143


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space:   392964
Effective search space used:   392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)