CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTTTCTGTTCTAGACTGGATGTCACAAGCTGCTTCAAGTTTCTG
CAGTTATCTCTTTACAAAAATTGTTTCAAATCTTCCTCCCTTAAAGTGTC
AGTGTTTTTCTCACAGCAACAGAACAAACCAGGTCAACTATGTATTCTAA
CAGCTGACTATGTACAAATTAACACACTATGTGCTATTTGTGAAGCAACA
TAACCTTTGGCAAATATTTAGAAAAAAGCATTAGTATTTCTATTAATATA
TATATATATATATATATACATACATAAAGCCAGGTAATAACTGAATTGAT
ATTTGATAGAATTTTAATGTCTTATCAATCTTGAGGCATCATTAGGGTTT
CAAAAGATGATGGTTTAGCTAGATGTATCACCTAAACTATCATGAAAAGA
AATAAAAAAAATAACCTAGAGATATTTTTCCAGAAAGACTCCAACATTAG
TTATTATGTAACTTAATAAATAGCTCTTTTACTATTTGCAACATATTTTC
CCAATTTTTAAAGACTCTGACTTGTAAATACATATTAACTATAAAGTAAA
GGATATTCATGCTACAATCTACAGACCTAGAGAGGCTAAGTGAAAAAGGA
GGGCTTAAGGCAGGGGCAGATGAATCTTCTTGGGTAGGAGAAGTATAGTC
GATCTCATAGGTAGACTGGATGTG

NTATTTTTTTTTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATATAGGGCAG
AGACCTGGAGGCATGAACTGAAGTAGAAGCCATTTAATAGTGTTTCTTAA
TGATTAACTCCCTGGTGCTGGGTCAGCCTGATTATCTTATATTACCCAAG
AACACCACTCTAGACTGGAATCATGCCCTCTGGAGTGAGCCCATCTGTAT
CAGTTATCAGGCAAGATAACACATCAAAGTTTTCTCTCCACACCAATCAG
ATGAAAGTATATTTTCAAATTAGGTTTCCTTTTCCATACTGATACGTCTA
TTGCAAATTTAGCTAAAGTGAATTCATTCCAAGGATCCCTGACCCCATGC
TTTTATTATCATTTACATGGTACAGTTTTCACTAAATGATTATTTTATTA
GTAAATATTTTAAAATTGGCCATTTCAAAAGGTTAAAGTGCTATAGGAAA
TAGAAAATATTTTGTTTATGCCTGTTTTCCTTTGAACTGTGAGCTAGATA
AGAAGCAGTGGTTTATCAATGATCTAAATTAATTATTGAAACACAGCATA
CAGTATTTATTTTGTAAACAAAGTAAGGTAATGAATATGAAAGAACTATA
AGTGTCTATGAGCAAGTCGACAGCTATTAATGAACAAGTCTATATTTTTG
TTGTTGTTACATAACAGACTGCCATATCCGGTGN

Query= MSMg01no189_f02.b1 MSMg01no189_f02.b1 CHROMAT_FILE:
MSMg01no189_f02.b1 PHD_FILE: MSMg01no189_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:16 2005
         (679 letters)



>mm_chr5_85260756_85261836
          Length = 1081

 Score = 1212 bits (627), Expect = 0.0
 Identities = 661/677 (97%), Gaps = 10/677 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcattttctgttctagactggatgtcacaagctgcttcaagtttctgcagttatct 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 992 gaattcattttctgttctagactggatgtcacaagctgcttcaagtttctgcagttattt 933

                                                                       
Query: 65  ctttacaaaaattgtttcaaatcttcctcccttaaagtgtcagtgtttttctcacagcaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ctttacaaaaattgtttcaaatcttcctcccttaaagtgtcagtgtttttctcacagcaa 873

                                                                       
Query: 125 cagaacaaaccaggtcaactatgtattctaacagctgactatgtacaaattaacacacta 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 cagaacaaaccaggtcaactatgtattctaacagctgactatgtacaaattaacacacta 813

                                                                       
Query: 185 tgtgctatttgtgaagcaacataacctttggcaaatatttagaaaaaagcattagtattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tgtgctatttgtgaagcaacataacctttggcaaatatttagaaaaaagcattagtattt 753

                                                                       
Query: 245 ctattaatatatatatatatatatatatacatacataaagccaggtaataactgaattga 304
           |||||||       | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ctattaa-------a-atacatatatatacatacataaagccaggtaataactgaattga 701

                                                                       
Query: 305 tatttgatagaattttaatgtcttatcaatcttgaggcatcattagggtttcaaaagatg 364
           |||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 700 tatttgatagaagtttaatgtcttatcaatcttgaggcatcgttacggtttcaaaagatg 641

                                                                       
Query: 365 atggtttagctagatgtatcacctaaactatcatgaaaagaaat--aaaaaaaataacct 422
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 640 atggtttagctagatgtatcacctaaactatcatgaaaagaaataaaaaaaaaataacct 581

                                                                       
Query: 423 agagatatttttccagaaagactccaacattagttattatgtaacttaataaatagctct 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agagatatttttccagaaagactccaacattagttattatgtaacttaataaatagctct 521

                                                                       
Query: 483 tttactatttgcaacatattttcccaatttttaaagactctgacttgtaaatacatatta 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tttactatttgcaacatattttcccaatttttaaagactctgacttgtaaatacatatta 461

                                                                       
Query: 543 actataaagtaaaggatattcatgctacaatctacagacctagagaggctaagtgaaaaa 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 actataaagtaaaggatattcatgctacaatctacagacctagagaggctaagtgaaaaa 401

                                                                       
Query: 603 ggagggcttaaggcaggggcagatgaatcttcttgggtaggagaagtatagtcgatctca 662
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 400 ggagggcttaaggcaggggcagatgaatcttcttgggtaggagaagtaaagtcgatctca 341

                            
Query: 663 taggtagactggatgtg 679
           |||||||||||||||||
Sbjct: 340 taggtagactggatgtg 324


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1081
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1071
Effective search space:   716499
Effective search space used:   716499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)