GAACAGNNNNTTCAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCGCGGAATTCAAGGCCCATACCTAAACATGATAAAAGCA
ATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGA
AGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCT
ACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAA
AAGGAGATCAAGGGGATACAAATTGGAAAGGAGGAAGTCAAAATATCACT
TTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCA
GAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAA
ATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACAGGC
TGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATAATA
TAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGAT
AAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAGGATG
GAAAGATCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGG
CTATCTTGCCAGAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATT
CCAACTCAATTCTTCAATGAATTAGAAGGAGCAAGTT

TTTTNCCCTTNTTNNCTTTNCTCCTCATCTCCNNNNNNNNNNNNNNNCCC
TCTATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGTGTGTGCTATCCTTACAGCAGTA
CTATTTACTACCCTGGTTAGCATGGTGCAAACACTGCAGGCAAAGTCTCT
CTTTAATAACATCCCCCACTCCAGGTCCAATTCTTATCTTTCCTTTGAGC
TAACACTTTTTTCCCCTGATGTTCATCCAATTCCAGCCAACATGAGTTTA
TTCTCGTGGCGCTTATTCCACTGAGTGACTGTAGTGTCTGTGGATGACAA
CAGGATCACTCAAACATGTCCTTTCTGCCTTCCTTGGAAAAGTACAAATT
CATATTACCTAGAAAAATCTTTAAAACTCCACATAGCCACTGATTCCCGA
ATTCTGCTTTTAGAAATTTTAATATAAGGACACATTCACTTATTGCAGAG
TAGGAGATTTAACTTGAGGAATTTCACCTTGCTGCTAATACAGGAATGTT
CTAGGCTATTAAAAACCCAATACTCAGAGTTAAATTATAATATGCATATA
ATGAGTATTACTTAGCCTTTGATCCTGGTGCTATAGAAGGACACTGAGTG
ACTAGGGTAGTTTTAATTTGCAACATTTAGTGAGGAAAGACTGTATGAAA
TAAGTATTTGATTCTATTGTTTGNAAAAATACATGTAGAANAAGACTTNG
AAGAGATGTAAGAAGACTTTAAGAATCATGA

Query= MSMg01no189_m03.g1 MSMg01no189_m03.g1 CHROMAT_FILE:
MSMg01no189_m03.g1 PHD_FILE: MSMg01no189_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:49 2005
         (555 letters)



>mm_chr5_46306269_46307224
          Length = 956

 Score = 1029 bits (532), Expect = 0.0
 Identities = 550/556 (98%), Gaps = 1/556 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgtgtgctatccttacagcagtactatttactaccctggttagcatggtgcaaacact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtgtgctatccttacagcagtactatttactaccctggttagcatggtgcaaacact 260

                                                                       
Query: 61  gcaggcaaagtctctctttaataacatcccccactccaggtccaattcttatctttcctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaggcaaagtctctctttaataacatcccccactccaggtccaattcttatctttcctt 320

                                                                       
Query: 121 tgagctaacacttttttcccctgatgttcatccaattccagccaacatgagtttattctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagctaacacttttttcccctgatgttcatccaattccagccaacatgagtttattctc 380

                                                                       
Query: 181 gtggcgcttattccactgagtgactgtagtgtctgtggatgacaacaggatcactcaaac 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggctcttattccactgagtgactgtagtgtctgtggatgacaacaggatcactcaaac 440

                                                                       
Query: 241 atgtcctttctgccttccttggaaaagtacaaattcatattacctagaaaaatctttaaa 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtcctttctgccttacttggaaaagtacaaattcatattacctagaaaaatctttaaa 500

                                                                       
Query: 301 actccacatagccactgattcccgaattctgcttttagaaa-ttttaatataaggacaca 359
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 actccacatagccactgattcccgaattctgcttttagaaaattttaatataaggacaca 560

                                                                       
Query: 360 ttcacttattgcagagtaggagatttaacttgaggaatttcaccttgctgctaatacagg 419
           ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ttcacttattgcagagtagaagatttaacttgaggaatttcaccttgctgataatacagg 620

                                                                       
Query: 420 aatgttctaggctattaaaaacccaatactcagagttaaattataatatgcatataatga 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatgttctaggctattaaaaacccaatactcagagttaaattataatatgcatataatga 680

                                                                       
Query: 480 gtattacttagcctttgatcctggtgctatagaaggacactgagtgactagggtagtttt 539
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atattacttagcctttgatcctggtgctatagaaggacactgagtgactagggtagtttt 740

                           
Query: 540 aatttgcaacatttag 555
           ||||||||||||||||
Sbjct: 741 aatttgcaacatttag 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space:   515570
Effective search space used:   515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)