Query= MSMg01no189_m23.b1 MSMg01no189_m23.b1 CHROMAT_FILE:
MSMg01no189_m23.b1 PHD_FILE: MSMg01no189_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:53 2005
(320 letters)
>mm_chr5_85722637_85723354
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 313/316 (99%), Gaps = 2/316 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgtatctcttgaaaataatctgtaaattcaatctccatttttggaagtaaatg 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 205 gaattcttgtatctcttgaaaataatctgtaaattgaatctccatttttggaagtaaatg 264
Query: 65 caactggaatcattatataaggagcctgtactgagaaaccttgagtttctgtaaccataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caactggaatcattatataaggagcctgtactgagaaaccttgagtttctgtaaccataa 324
Query: 125 agacccatatagaggtagaaccattgaaaacacacaggttctcgtcagatttttcctaga 184
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 agacccatatagaggtagaaccattgaaaacaca--ggttctcgtcagatttttcctaga 382
Query: 185 tatttgatttcaaacttccaaaaatggtgagcatggaaagtctatagcttttaaactacc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tatttgatttcaaacttccaaaaatggtgagcatggaaagtctatagcttttaaactacc 442
Query: 245 cagtcttgggttctttgctatagcagcaagaatgaactactatggtttattatcatacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagtcttgggttctttgctatagcagcaagaatgaactactatggtttattatcatacag 502
Query: 305 tgttgcattgagattc 320
||||||||||||||||
Sbjct: 503 tgttgcattgagattc 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 718
Length adjustment: 9
Effective length of query: 311
Effective length of database: 709
Effective search space: 220499
Effective search space used: 220499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no189_m23.g1 MSMg01no189_m23.g1 CHROMAT_FILE:
MSMg01no189_m23.g1 PHD_FILE: MSMg01no189_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:53 2005
(293 letters)
>mm_chr5_85773872_85774564
Length = 693
Score = 528 bits (273), Expect = e-154
Identities = 288/293 (98%)
Strand = Plus / Minus
Query: 1 aaccacactgagggaattcaggtttttaaggtaaaatttaaacaacatattcttttgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaccacactgagggaattcaggtttttaaggtaaaatttaaacaacatattcttttgcag 434
Query: 61 aaaaggcatatatggaattcagttaagggcaagcatgtatgtggggctcttgtaagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aaaaggcatatatggaattcagttaagggcaagcatgtatgtggggctcttgtaagagag 374
Query: 121 acaggtaggtgatacagatacaaattgagtgcttacacttcagagtgtgaatatggccag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 373 acaggtaggtgatacagatacaaattgagtgcttacacttcagagagtgaatatggccag 314
Query: 181 aatgattattcccacagaatcttttcagagtagataatcccatcctctttggatagaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aatgattattcccacagaatcttttcagagtagataatcccatcctctttggatagaaag 254
Query: 241 agccacactagatgcagctggacagtaagtacgacattaggaccaaagaagtg 293
||||||||||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct: 253 agccacactagatgcagctggacagtacgtacaacattatgaccaaagaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
