TCCNTTCCACCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTGGGACAAGCAAATGAAAGCCCCATGAGTTCC
TTCCTGCAGTCACCTTATGGAACGGCTGCCTGTCCCATTCTCTCTTCCAC
GTGGCATCGTCATTGCTGGGGCCCTGACCTCCGAGGGGACAGGTGGCTGT
GTCACTCTTTGTTCTGTCCAGACTATTCCAATATGGCTTGGCGTGCATGT
CTGACTACTATACACACACAGAAAAGTGAGACACGGTGGTTCCTGTTGCT
TTCTGCCAAGCTGTTGCCTTTGGTAAAGGTGACAGCCAGTGATTACTGAG
GCTTCCTGCTCCTTGCCTATTTTTTTAGACCACCACCCCACCAAAGGTCC
CCATGTGAGAACTCCTTANAAAAAAAAAGATACAGAATTGTGTGGAACCA
CACTGATAGAGTATTCTACAATTCCCACTCCCAGGATGCCAGATTGTCCC
CCACACCCTGAGCGTTCCCACAGGCATCCTAACCACCGCAAAAAGCATAG
AAACACAATACCCACTGTTTCTGTATTCTCACCATGAAAATATGTTTGGG
TTTAGGAAGTGTGGCTCTACTGTCTGGCTGCAAAATAAATCCTGCCTTCA
CTGAAGATGCTCCAGCTGGAGGTTGGCAAGAGATTACTGGAGACCAACAG
CATCCTTAGGTATGATGCCTTTGGGGAGGATCATGGTGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAGCCACCATGCCTCAAGATCTT
CATACCAAGATCCAGGTCAGAAACTTGTATCTCCCAGCCTCCAGATTAGC
ATCACTAGTGAGCCTTCCAATTCTGGATTGTAGTTCATTCCAGATATAGT
CAAGTTGAGAACCAGGAATAGCCACTACACCTTCTACCTGTTGAATTCCT
CTTCATGTGCATTGGCTGTTACATGGTGCTCCAACATGGCCCCCAGGCCT
GCCAATGTGTATTGGCATTCAGCTGTAGAAACCACTTTCTCCTTTCTCTC
TTGTGTTATATATCTGCCCCACCCACACAACTAAAGGAGCATCCTACCAT
TCTTCACAGCATTCCTGAGGATGATGGCCCAAGGAGATAACAGGCTAGGC
TTTTGCTTTTAGTACTACCCACCTACCACAAGGGATGTGATTCCACTGGG
CTGTGGGTGGATATTCGTCAGACAGAGACGTGACTTGGTAGATGGAGATG
AGACACCCATGTACCGTTTGTTGGAAAGAGGGATGGAATGAAGCGGAGTT
TCACAGGGTAGGAGGGAAACACACAGGGTACTCTCTGCATTACAAAATTC
TAATTTTGGTCACAAAAGGTGTGTGTGTGTTGTGTGTGTTCTGCCTTAAG
AA

Query= MSMg01no190_a07.b1 MSMg01no190_a07.b1 CHROMAT_FILE:
MSMg01no190_a07.b1 PHD_FILE: MSMg01no190_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:08 2005
         (311 letters)



>mm_chr5_127891493_127892203
          Length = 711

 Score =  540 bits (279), Expect = e-158
 Identities = 300/307 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgggacaagcaaatgaaagccccatgagttccttcctgcagtcaccttatggaa 64
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 511 gaattctgggacaagcaaatgaaagccccatgagttcctccctgcagtcaccttatggaa 452

                                                                       
Query: 65  cggctgcctgtcccattctctcttccacgtggcatcgtcattgctggggccctgacctcc 124
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 451 cggctgcctgtcccattctctcttccacgtggcattgtcattgctggggccctgacctcc 392

                                                                       
Query: 125 gaggggacaggtggctgtgtcactctttgttctgtccagactattccaatatggcttggc 184
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gaggggacaggttgctgtgtcactctttgttctgtccagactattccaatatggcttggc 332

                                                                       
Query: 185 gtgcatgtctgactactatacacacacagaaaagtgagacacggtggttcctgttgcttt 244
           ||| |||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 331 gtgtatgtctgactactacacacacacagaaaactgagacatggtggttcctgttgcttt 272

                                                                       
Query: 245 ctgccaagctgttgcctttggtaaaggtgacagccagtgattactgaggcttcctgctcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ctgccaagctgttgcctttggtaaaggtgacagccagtgattactgaggcttcctgctcc 212

                  
Query: 305 ttgccta 311
           |||||||
Sbjct: 211 ttgccta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space:   212004
Effective search space used:   212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no190_a07.g1 MSMg01no190_a07.g1 CHROMAT_FILE:
MSMg01no190_a07.g1 PHD_FILE: MSMg01no190_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:08 2005
         (283 letters)



>mm_chr5_127813258_127813940
          Length = 683

 Score =  509 bits (263), Expect = e-148
 Identities = 275/279 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagccaccatgcctcaagatcttcataccaagatccaggtcagaaacttgtatctccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagccaccatgcctcaagatcttcataccaagatccaggtcagaaacttgtatctccca 260

                                                                       
Query: 61  gcctccagattagcatcactagtgagccttccaattctggattgtagttcattccagata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctccagattagcatcactagtgagccttccaattctggattgtagttcattccagata 320

                                                                       
Query: 121 tagtcaagttgagaaccaggaatagccactacaccttctacctgttgaattcctcttcat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 tagtcaagttgagaaccaggaatagccactacaccttctacctgttgaactcctcttcat 380

                                                                       
Query: 181 gtgcattggctgttacatggtgctccaacatggcccccaggcctgccaatgtgtattggc 240
           ||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 gtgcactggcttttacatggtgctccaacatggaccccaggcctgccaatgtgtattggc 440

                                                  
Query: 241 attcagctgtagaaaccactttctcctttctctcttgtg 279
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcagctgtagaaaccactttctcctttctctcttgtg 479


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space:   184676
Effective search space used:   184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)