Query= MSMg01no192_m17.b1 MSMg01no192_m17.b1 CHROMAT_FILE:
MSMg01no192_m17.b1 PHD_FILE: MSMg01no192_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:40 2005
(425 letters)
>mm_chr5_46826611_46827435
Length = 825
Score = 369 bits (191), Expect = e-106
Identities = 309/409 (75%), Gaps = 97/409 (23%)
Strand = Plus / Plus
Query: 17 gaattccttctgaagaatcccatgtagagcagtaaagaatctgaagtgaggtgaatagta 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gaattccttctgaagaatcccatgtagagcagtaaagaatctgaagtgaggtgaatagta 284
Query: 77 aggcaaaaaaaaaaaaaaagaacaaatagacaaagataggtaacatcattaaatcagtta 136
|| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ag--------acaaaaaaagaacaaatagacaaagataggtaacatcattaaatcagtta 336
Query: 137 aagaagccaagtcagtctacttagagggagttcctcattgaatttcagagtcttgtcaat 196
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aagaagccaagtcagtctagttagagggagttcctcattgaatttcagagtcttgtcaat 396
Query: 197 tcctaaccctaagtctatccaaaccttatccttagctctaaccctaaccctaaacctaaa 256
|||||||||||| ||||||||||||
Sbjct: 397 tcctaaccctaa-----------------------------ccctaaccctaa------- 420
Query: 257 cctaaccctaacccaaaatctaaccctaaccaaaaacctaactctaaccctaattctaat 316
||||||||| |||||||||||
Sbjct: 421 -----ccctaaccc------taaccctaacc----------------------------- 440
Query: 317 cttaaccctaaccctaaccctaaccctaagcctaaccctaactatgtctgagcatccagc 376
|||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 -------ctaaccctaaccctaaccctaa------ccctaactatgtctgagcatccagc 487
Query: 377 ctcctgtgtccactgtggtcatggtttacatcttgggattaaaccacag 425
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 488 ctcctgtgtccaatgtggtcatggtttacatcttgggattaaaccacag 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_m17.g1 MSMg01no192_m17.g1 CHROMAT_FILE:
MSMg01no192_m17.g1 PHD_FILE: MSMg01no192_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:40 2005
(387 letters)
>mm_chr5_46930973_46931759
Length = 787
Score = 735 bits (380), Expect = 0.0
Identities = 383/384 (99%)
Strand = Plus / Minus
Query: 1 cattgctactgaaattgtgagagttacaaccttcacctaggaggggcaagcaccctcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cattgctactgaaattgtgagagttacaaccttcacctaggaggggcaagcaccctcctg 525
Query: 61 attgttatcctgggtgcaggaaccaaggttcacctgaacatgaagaacactaatacagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 524 attgttatcctgggtgcaggaaccaaggttcacctgaacatgaagaacattaatacagtt 465
Query: 121 gagaaagaatagctcagtttgcttttctgctaggcaaatccagaatgttacaggatgtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gagaaagaatagctcagtttgcttttctgctaggcaaatccagaatgttacaggatgtga 405
Query: 181 tgtggaaatttttaatgtgccatctttacaaaaacattcaaacgtcaaagactgggaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tgtggaaatttttaatgtgccatctttacaaaaacattcaaacgtcaaagactgggaccc 345
Query: 241 atgacggttacactgatgttttagaagtacgttaacttctaaataaactttgtaatatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atgacggttacactgatgttttagaagtacgttaacttctaaataaactttgtaatatct 285
Query: 301 gtcatggcattttgaaaaggcgaaatttgtcaactcattttataaattttcaacatgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gtcatggcattttgaaaaggcgaaatttgtcaactcattttataaattttcaacatgaca 225
Query: 361 tttttatggattacttgtgatttc 384
||||||||||||||||||||||||
Sbjct: 224 tttttatggattacttgtgatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
