Query= MSMg01no193_m11.b1 MSMg01no193_m11.b1 CHROMAT_FILE:
MSMg01no193_m11.b1 PHD_FILE: MSMg01no193_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:24 2005
(415 letters)
>mm_chr5_20569923_20570737
Length = 815
Score = 607 bits (314), Expect = e-178
Identities = 374/398 (93%), Gaps = 10/398 (2%)
Strand = Plus / Minus
Query: 14 ggaattctaccagcactaaaaaatctttgcaggacaggtggtggaggtgcatatgcgcct 73
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 647 ggaattctaccatcactaaaaaatctttgcaggacaggtagtggaggtgcatatgcgcct 588
Query: 74 ttaattccagtactctggagccagaggcaggcggatctctatgagtttgaggccagcctg 133
|||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||
Sbjct: 587 ttaattccagtactctggaggcagaggcaggcggatctctatgagtttgaggctatcctg 528
Query: 134 gtctacagagtgagttccaggatagcccgtgctaccgaattagatttgactttgactttc 193
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 527 gtctacagagtgagttccaggatagccagtgctacctaattagatttgactttgactttc 468
Query: 194 gtatctctctaataacaccagttatttatgtttaactttaagctaaataactgagaagat 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtatctctctaataacaccagttatttatgtttaactttaagctaaataactgagaagat 408
Query: 254 catcagaatggtagatgtgataagaatataatcacacagct-gggcgtggtggtgcatgc 312
||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||
Sbjct: 407 catcagaatggtagatgtgataagaatataatcacacag-tcgggcgtggtggcgcatgc 349
Query: 313 ctttaatcccagcacttgggaggcagaggcaggcggatttctgagtttgaggtt----tt 368
|||||||||||| |||||||||||||||||||||| ||||||||||| |||| | |
Sbjct: 348 ctttaatcccagaacttgggaggcagaggcaggcgaatttctgagttcgaggctagcct- 290
Query: 369 tttggtctacaaagtgagctccaggacagccagggcta 406
||||||||||||||| |||||||||||||| ||||
Sbjct: 289 ---ggtctacaaagtgagttccaggacagccagagcta 255
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_m11.g1 MSMg01no193_m11.g1 CHROMAT_FILE:
MSMg01no193_m11.g1 PHD_FILE: MSMg01no193_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:24 2005
(331 letters)
>mm_chr5_20473338_20474069
Length = 732
Score = 540 bits (279), Expect = e-158
Identities = 310/323 (95%), Gaps = 8/323 (2%)
Strand = Plus / Plus
Query: 1 gtctcgaaaaaaaacaaaaacaaacaaacaacaaaaaaagcaaacgctcgcctactgagc 60
|||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 206 gtctcg-aaaaaaacaa----aaacaaacaac-aaaaaagcaaacgctcgcctactgagc 259
Query: 61 taaagccccagtggtgttaatgtatgaaaagagggtaggagaccatgacagaagcagaaa 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 260 taaagccccagtggtgttaatgtattaaaagagggtaggagaccatgacagaaacagaaa 319
Query: 121 agaacacttcctactagagccctgaagatttcttgtgtttggag--aagagtttacgttt 178
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 320 agaacacttcctactagagccctgaagatttcttgtgtttggagaaaagagtttacattt 379
Query: 179 tctattacacttccgttttttaatttgatgctaccaatcatgtagctattttcagcctac 238
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 380 tctattacacttccgtttttgaatttgatgctaccaatcatgtagctattttcaacctac 439
Query: 239 tctgctcaaagcaggttagttgcttaactttgattggcagtgacgttaacgtggtgattc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tctgctcaaagcaggttagttgcttaactttgattggcagtgacgttaacgtggtgattc 499
Query: 299 tattttaatccactcattcctgt 321
|||||||||||||||||||||||
Sbjct: 500 tattttaatccactcattcctgt 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 732
Length adjustment: 9
Effective length of query: 322
Effective length of database: 723
Effective search space: 232806
Effective search space used: 232806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
