CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGCTCCGCGGAATT
CTTTGTTCTTTCTGAACCCCATTTTTTAATGGGGTTATTTGATTTTCTGA
AGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCT
GATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTTGTCTTTTTGT
CTTACTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGT
CCCATTTGTCAATTCTCGATCTTACAGTACAAGCCATTGCTGTTCTGTTC
AGGAATTTTTCCCCTGTGTTTTTATCTTCAAGGCTTTTCCCCACTTTCTC
CTCTATAAGTTTCAGCGTCTCTGGCTTTATGTGAAGTTCCTTGATCCACT
TAGATTTGACCCCACCCCCAGGAGATAAGTATGGATCGATTCACATTCTT
CTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTC
TTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCAT
AGGTGTGCGGGCTCATTTTCTGGGCCTTCTATTCTCTTCTTATTGCTCTA
CTTGTCTGCACCTACCACATTTTCATGCTGTATCTTACCCCCTTTTCTTC
TGTCATTTTCTCTTTTTTTTTTTTTTTTTGATTTCACTGATCTCCTTTTT
ATACTTCTAATACTTTCTTTCATTCAATTTATTTTTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTTTTCACCCCATTTGCTCTGGTGCAGA
ACCCAAGAGAAACTTTTTAATATGGTTGTTTTTCTTGTGTCCTTACAAGC
TACTGATGTAGTTCCCTAAACTAGAGATAACCAAAAGCTAAAATAGTCGA
TTAAACTACTTCCATGTTTATATTGATATAAAATGAGAGCACCCATCTTA
AACATCAATGATTTCCTCTAATCTCTATAGTATTTTGTTTTGATATTTTA
AAGGCTTATTTAATATTTAAGTTTAATTTTTAAAACTATAATAATTTAGT
CTCTACTATAACTGTTTATATGTCATGGCAAAGATGAAAGCTGGATTTAA
GTTTGCTTCCGTGGACAGCCACCTTATTCAGCATCATTGATAGGCTCTGT
CACAAAATTGGTATTCAAAATTCAGCTCATTTAAATGTTATATTTATAAG
GTCATTCATCCTAAATCCATCCGTCTGTCTGTCCATTGGTCCATCCATCC
ATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTGTTCAA
GTATTTACACCTGCTGCTGCAGATACACTCAGGGGGTATAGCACCTGTAT
ATAGCATGCACAATGTTTTTAGTATGAACCTAACCAAAATGTCCACCTGT
ATTACCAGAGCTGTATGTTAGATCTACAGATGCTN

Query= MSMg01no194_o21.g1 MSMg01no194_o21.g1 CHROMAT_FILE:
MSMg01no194_o21.g1 PHD_FILE: MSMg01no194_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:58 2005
         (567 letters)



>mm_chr5_19900406_19901372
          Length = 967

 Score =  946 bits (489), Expect = 0.0
 Identities = 510/517 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   tcaccccatttgctctggtgcagaacccaagagaaactttttaatatggttgtttttctt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tcaccccatttgctctggtgcagaacccaagagaaactttttaatatggttgtttttctt 855

                                                                       
Query: 65  gtgtccttacaagctactgatgtagttccctaaactagagataaccaaaagctaaaatag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gtgtccttacaagctactgatgtagttccctaaactagagataaccaaaagctaaaatag 795

                                                                       
Query: 125 tcgattaaactacttccatgtttatattgatataaaatgagagcacccatcttaaacatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tcgattaaactacttccatgtttatattgatataaaatgagagcacccatcttaaacatc 735

                                                                       
Query: 185 aatgatttcctctaatctctatagtattttgttttgatattttaaaggcttatttaatat 244
           | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 734 agtgatttcctctaatctctatagtattttgttttgatattttaaaggtttatttaatat 675

                                                                       
Query: 245 ttaagtttaatttttaaaactataataatttagtctctactataactgtttatatgtcat 304
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ttaagtttaagttttaaaactataataatttagtctctactataactgtttatatgtcat 615

                                                                       
Query: 305 ggcaaagatgaaagctggatttaagtttgcttccgtggacagccaccttattcagcatca 364
           ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||
Sbjct: 614 ggcaaagatgaaagctggatttaagtttgcttccgtggagagttaccttattcagcatca 555

                                                                       
Query: 365 ttgataggctctgtcacaaaattggtattcaaaattcagctcatttaaatgttatattta 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttgataggctctgtcacaaaattggtattcaaaattcagctcatttaaatgttatattta 495

                                                                       
Query: 425 taaggtcattcatcctaaatccatccgtctgtctgtccattggtccatccatccatccat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 taaggtcattcatcctaaatccatccgtctgtctgtccattggtccatccatccatccat 435

                                                
Query: 485 ccatccatccatccatccatccatccatccatccatc 521
           |||||||||||||||||||||||||||||||| ||||
Sbjct: 434 ccatccatccatccatccatccatccatccattcatc 398


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 98
Number of extensions: 43
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 41
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)