TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCCGCGG
AATTCCACATATTCCCAGAGACACTGAAATATATAGAAGAGAAAGTAGGG
AAAAGCCTTGAAGATATGGGTACAGGGAAAAAAATCCTGAATAGAACAGC
AATGGCTTGTGCTATAAGATCGAGAATCAATAAATGGGACTTCATAAAGT
TGCAAAGCTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCA
CCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGAGACT
AATATCCAATATATATAAAGAACTCAAGAAGGTGGACTCCAGAAAATCAA
GTAACCCCATTAAAAAATGGGGCTCAGAGCTGAACAAAGAATTCTTACCT
GAGGAACACCGAATGGCTGAGAAGCACCTGAAAAAATGTTCAACATCCTT
AATCATGAGGGAAATTCAAATCAAAACAACCCTGAGATTCCACCTCATAC
CAGTCAGAATGGCTAATGTCAAAAATTCAGGTGACAGCAGATGCTGGCAA
GGATGTGGAGAAAGAGAAACACTCCTCCATTGTTGGTGGGATTGCAAGCT
TGTACAACCACTTTGGAAATCAGTCTGGAGGTTCTTCAGAAAATTGGACA
TAGTACTACCAGAGGATCCTGTAATACCTCTCCTGGGCATATATCCTGAA
GATGTTCCAACTGGTAATAAGGGCACATCC

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATACTTTTAAGAGCATTCCAGCTT
GTCTTCAATCTTCTGCTCTTTGTAAGGTAGCAGGGCATGGCCCATTCTTA
TGTTTTATAAAAAGAGTTGGTAGATTAAAAAGGCAATTTGAGCGATGGAG
GGGTAAATCTTTCGAGCTCTATCTTCCTTTAGGGCAGAGAAGGTCCTCTG
GGTTAGGTCTTTTTGTGAAGATCATTGTTGCATACAGCTTTGTATAAATG
TGCAATTCAGAAACTGTCCCAATATGTCTGCACATATGGTTGATTTTAGC
TGTAAGTTCACATTTCCTTTAACACATAGGCTGAGTGTATTCCCATAATG
GTAGCTGAGCAATTTCTCTGCTATGGCTCAATTTCTTTCTTTCTCTTCTG
CAGTTCCCTCTCCTTTCTTTACCTAGCAGTAACTTTACTAAAAGGGTCAT
TAATAAAAAAAAAAACCAACATGCAAGCCGGCGCCAGGAAGTTTAAGTTT
AGATAACAGTCCCGTCACATTTGGCTGCTGGACTGAAACTGGATGAGTAA
ATAGAACGGAATGCCGTGTTATGATTCCCTCGATTATGCATGTAAGGCAC
TGCTTAGGCTTATACCTCGTCAGCCATTTCTAACTACGGACCATTCTACT
GTGTTGGATGTTCTGGCACTACACTTTTA

Query= MSMg01no195_k08.g1 MSMg01no195_k08.g1 CHROMAT_FILE:
MSMg01no195_k08.g1 PHD_FILE: MSMg01no195_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:55 2005
         (441 letters)



>mm_chr5_51857365_51858205
          Length = 841

 Score =  812 bits (420), Expect = 0.0
 Identities = 435/440 (98%), Gaps = 1/440 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatacttttaagagcattccagcttgtcttcaatcttctgctctttgtaaggtagcaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aatacttttaagagcattccagcttgtcttcaatcttctgctctttgtaaggtagcaggg 581

                                                                       
Query: 61  catggcccattcttatgttttataaaaagagttggtagattaaaaaggcaatttgagcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 catggcccattcttatgttttataaaaagagttggtagattaaaaaggcaatttgagcga 521

                                                                       
Query: 121 tggaggggtaaatctttcgagctctatcttcctttagggcagagaaggtcctctgggtta 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 520 tggaggggtaaatctttcgagctctatcttcctttagggcagagagggtcctctgggtta 461

                                                                       
Query: 181 ggtctttttgtgaagatcattgttgcatacagctttgtataaatgtgcaattcagaaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ggtctttttgtgaagatcattgttgcatacagctttgtataaatgtgcaattcagaaact 401

                                                                       
Query: 241 gtcccaatatgtctgcacatatggttgattttagctgtaagttcacatttcctttaacac 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 400 gtcccaatatgtctgcacatatggttgattttagctgtaagttcacatttccttgaacac 341

                                                                       
Query: 301 ataggctgagtgtattcccataatggtagctgagcaatttctctgctatggctcaatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ataggctgagtgtattcccataatggtagctgagcaatttctctgctatggctcaatttc 281

                                                                       
Query: 361 tttctttctcttctgcagttccctctcctttctttacctagcagtaactttactaaaagg 420
           ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 280 tttctttctcttctgcagttccctctcctttctttacatagtagtaactttactaaaagg 221

                               
Query: 421 gtcattaataaaaaaaaaaa 440
           |||||||| |||||||||||
Sbjct: 220 gtcattaa-aaaaaaaaaaa 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)