Query= MSMg01no196_b10.b1 MSMg01no196_b10.b1 CHROMAT_FILE:
MSMg01no196_b10.b1 PHD_FILE: MSMg01no196_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:31 2005
(319 letters)
>mm_chr5_39132680_39133399
Length = 720
Score = 555 bits (287), Expect = e-162
Identities = 308/315 (97%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaattttccaagtcagggcagactagatcccattcggtcttgacatggcccta 63
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 518 ggaattccaattttccaagtcagggcagactggatcccatgcggtcttgacatggcccta 459
Query: 64 agcaaagaaagcctgggaaggaatccactgtcagaacgtcccaactggcagaacaggggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agcaaagaaagcctgggaaggaatccactgtcagaacgtcccaactggcagaacaggggg 399
Query: 124 ccatgccaggagatcccatcgtcctgatctgctcccttcagctgtgactctgcctgaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 398 ccatgccaggagatcccatcgtcctgatctgctcccttcagctgtgattctgcctgaaaa 339
Query: 184 tgagaggagctgaaaataagtttttaaaggttaagaaggaaaagggaggaggggggtgga 243
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 338 tgagaggagctgaaaataagtttttaaaggttaagaaggaaaagggaggagtggggtgga 279
Query: 244 acaaaggagaaaagcacttctacctcactcaaatatatttgctaacaggaaaaaaaaa-g 302
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 278 acaaaggagaaaagcacttctacctcactcaaatatatttgctaacagaaaaaaaaaaag 219
Query: 303 ttaacaatagaacta 317
|||||| ||||||||
Sbjct: 218 ttaacagtagaacta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no196_b10.g1 MSMg01no196_b10.g1 CHROMAT_FILE:
MSMg01no196_b10.g1 PHD_FILE: MSMg01no196_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:31 2005
(283 letters)
>mm_chr5_39049613_39050295
Length = 683
Score = 310 bits (160), Expect = 9e-89
Identities = 166/168 (98%)
Strand = Plus / Plus
Query: 1 aggcgaccaggatgtgaggcagcagatgatgctgacacccatctgaaaggaacacacttc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 aggcgaccaggatgtgaggcagcagatgacgctgacacccatctgaaaggaacacacttc 260
Query: 61 gagtagcaggttcttggcacctctagggcgtgtttctttcatttcgttcatggctgtgtg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagtagcaggttctcggcacctctagggcgtgtttctttcatttcgttcatggctgtgtg 320
Query: 121 gagatcatgtgtgtatgccacagacaagatgttaagatattcagtaaa 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagatcatgtgtgtatgccacagacaagatgttaagatattcagtaaa 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
