Query= MSMg01no196_c11.b1 MSMg01no196_c11.b1 CHROMAT_FILE:
MSMg01no196_c11.b1 PHD_FILE: MSMg01no196_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:36 2005
(149 letters)
>mm_chr5_137799304_137799848
Length = 545
Score = 255 bits (132), Expect = 7e-73
Identities = 141/146 (96%), Gaps = 4/146 (2%)
Strand = Plus / Plus
Query: 4 ggaattcagcttgcttttgctttccttttcctttttcttttctttgttgtcagcactgag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcttgcttttgctttccttttcctttttcttttctttgttgtcagcactgag 263
Query: 64 gatttgagccaaactccgtacgagctgcgttatatcctccaccctttctttagttgtttc 123
|||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 gatttgagccaaactctgtacgagctgcgttatatcctccacccttt----agttgtttc 319
Query: 124 ttttagccgggtggtttggtttgggt 149
||||||||||||||||||||||||||
Sbjct: 320 ttttagccgggtggtttggtttgggt 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 545
Length adjustment: 8
Effective length of query: 141
Effective length of database: 537
Effective search space: 75717
Effective search space used: 75717
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no196_c11.g1 MSMg01no196_c11.g1 CHROMAT_FILE:
MSMg01no196_c11.g1 PHD_FILE: MSMg01no196_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:36 2005
(287 letters)
>mm_chr5_137923169_137923855
Length = 687
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Minus
Query: 1 tttagatctcatgggggtttccccagacagcacgagccctgcactggaccacagagggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 486 tttagatctcatgggggtttccccagacagcacgagccctgcactggacaacagagggtc 427
Query: 61 aaggagccatagacagaatggccgctgactctcagcgttcatgggagggaaagggtttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 aaggagccatagacagaatggccgctgactctcagcgttcatgggagggaaagggtttga 367
Query: 121 cgttttgtgtcttttaaaaataccactggcaacagctgaaatcaccaaccagactcctgg 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cattttgtgtcttttaaaaataccactggcaacagctgaaatcaccaaccagactcctgg 307
Query: 181 cttgtctctcttcatgactgtacacaccacacaactctcctagctgtacctcaccccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cttgtctctcttcatgactgtacacaccacacaactctcctagctgtacctcaccccatc 247
Query: 241 tggtcgcaaggcatcagatctgggaaaccagaggtggagggggttg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tggtcgcaaggcatcagatctgggaaaccagaggtggagggggttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
