Query= MSMg01no197_n14.b1 MSMg01no197_n14.b1 CHROMAT_FILE:
MSMg01no197_n14.b1 PHD_FILE: MSMg01no197_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:52 2005
(658 letters)
>mm_chr5_92244983_92246039
Length = 1057
Score = 1164 bits (602), Expect = 0.0
Identities = 641/654 (98%), Gaps = 1/654 (0%)
Strand = Plus / Plus
Query: 5 gaattcactgtgaaggcagcctgcggagcagcaccgtctcttatacgcaggggaatttca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgtgaaggcagcctgcggagcagcaccgtctcttatacgcaggggaatttca 264
Query: 65 aacaagaataaactatcagtgagccacataaggcctaagcacacttggcctttctccctt 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacaagaataaactatcagtga-ccacataaggcctaagcacacttggcctttctccctt 323
Query: 125 tcctgatatgatcctgcaattttataggaatctcatcaccagtcactccctctaccataa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcctgatatgatcctgcaattttataggaatctcatcaccagtcactccctctaccataa 383
Query: 185 aagatgtctctccaacctcttgtgcaacctttatagatcattgttttatttgatcaaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aagatgtctctccaacctcttgtgcaacctttatagatcattgttttatttgatcaaatt 443
Query: 245 gtaaccccacccaacacatcctcaggaacttttgtttgacctcatttatcaaagagaaga 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 gtaaccccacccaacacatcctcaggaactttcgtttgacctcatttatcaaagagaaga 503
Query: 305 gaaaaagatttctcggaaaccctgggcttaacttcagcacctaccaaagcagtaagtatc 364
||||||||| ||| ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 504 gaaaaagatccctcagaaaccctggggttaacttcagcacctaccaaagcagtaggtatc 563
Query: 365 cagctgctgtgagaagtccacagctatgtctctctgttagcttctacaccaaaatctatg 424
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 cagctgctgtgagaagtccacagctatgtctctctgttagcttcttcaccaaaatctatg 623
Query: 425 ccaaaaacatctcctgataaactccaattctgcttcacaatggctcatcctgaaaaatca 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaaaaaaatctcctgataaactccaattctgcttcacaatggctcatcctgaaaaatca 683
Query: 485 tttctgtgttgaagccaagaaacccagctttatctaaatagagagaaatgtcagaaaaac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttctgtgttgaagccaagaaacccagctttatctaaatagagagaaatgtcagaaaaac 743
Query: 545 tattcagggggacatcatggagctgggtgccccagctccccacggccacagacagcacta 604
|||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 744 tattcagggggacatcatagagctgtgtgccccagcttcccacggccacagacagcacta 803
Query: 605 acatcagtaagttgtcactgacactggccctaccagctggagatacagtgtaag 658
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 804 acatcagtaagttgtcactgacactggacctaccagctggagatacagtgtaag 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1057
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1047
Effective search space: 678456
Effective search space used: 678456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_n14.g1 MSMg01no197_n14.g1 CHROMAT_FILE:
MSMg01no197_n14.g1 PHD_FILE: MSMg01no197_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:52 2005
(111 letters)
>mm_chr5_92379027_92379537
Length = 511
Score = 163 bits (84), Expect = 4e-45
Identities = 105/114 (92%), Gaps = 6/114 (5%)
Strand = Plus / Minus
Query: 1 attgctgaggcataataagcctaaaaattaagcaaaatattccaattt---gccacaatt 57
|||||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct: 311 attgctgaggcataataagcctaaaaattaagcaaaatattccaatttgtag--a-aatt 255
Query: 58 tcagttttattaattaaggtaaattctgagtgccagtgatcatattgaaatcat 111
||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 254 tcagttttattaattaaggtaaattctgagtgccagtgaaaataatgaaatcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 111
Length of database: 511
Length adjustment: 8
Effective length of query: 103
Effective length of database: 503
Effective search space: 51809
Effective search space used: 51809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
