Query= MSMg01no198_m06.b1 MSMg01no198_m06.b1 CHROMAT_FILE:
MSMg01no198_m06.b1 PHD_FILE: MSMg01no198_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:06 2005
(300 letters)
>mm_chr5_99786959_99787658
Length = 700
Score = 551 bits (285), Expect = e-161
Identities = 294/297 (98%)
Strand = Plus / Minus
Query: 1 ccaggctgacttccatctcatagattgcctctgcctcccaagcactgggattaaaaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccaggctgacttccatctcatagattgcctctgcctcccaagcactgggattaaaaaaag 498
Query: 61 gtacctctattccccaccaggagtattatagtttcaagaaaatctccttgtctcttagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 497 gtacctctattccccaccaggagtattatagtttcaagaaaatctccttctctcttagaa 438
Query: 121 atataagatttagtctttaggttttgcctgtgagcttaaagtactaactactgaaaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atataagatttagtctttaggttttgcctgtgagcttaaagtactaactactgaaaaata 378
Query: 181 gaaataacctgtagttatttgcaataaaatttggacttttttggcttataaaaggaacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gaaataacctgtagttatttgcaataaaatttggacttttttggcttataaaaggaacag 318
Query: 241 tcattgtctgattgcaaaattaatatctccccattcttcctcattatgacaacttga 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcattgtctgattgcaaaattaatatctccccattcttcctcattatgacaacttga 261
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_m06.g1 MSMg01no198_m06.g1 CHROMAT_FILE:
MSMg01no198_m06.g1 PHD_FILE: MSMg01no198_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:06 2005
(289 letters)
>mm_chr5_99654643_99655330
Length = 688
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 ttctttaaaaacaaaccagtgcaaaccggtgaaatggcagctgggatatcttagagatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctttaaaaacaaaccagtgcaaaccggtgaaatggcagctgggatatcttagagatga 260
Query: 61 atgctagagagcttgtctggtaggtataaaagctccaggatcaacccccagtactgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgctagagagcttgtctggtaggtataaaagctccaggatcaacccccagtactgtaag 320
Query: 121 tgtgaactgctgctaattcaggatcagccttctttctttaaggcatcgtcagttccacgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtgaactgctgctaattcaggatcagccttctttctttaaggcatcgtcagttccacgt 380
Query: 181 ctagaaatcaatgctaatgaggaggaccatgtttgcagaaacacaaataggatcgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagaaatcaatgctaatgaggaggaccatgtttgcagaaacacaaataggatcgggaag 440
Query: 241 ggactgaaaaccatagtaaccatgtgagagacgcatggttaagaaca 287
|||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ggactggaaacca-agtaaccatgtgagagacgcatggttaagaaca 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
