Query= MSMg01no199_a11.b1 MSMg01no199_a11.b1 CHROMAT_FILE:
MSMg01no199_a11.b1 PHD_FILE: MSMg01no199_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:27 2005
(447 letters)
>mm_chr5_97099283_97100129
Length = 847
Score = 826 bits (427), Expect = 0.0
Identities = 442/447 (98%)
Strand = Plus / Plus
Query: 1 tccctcctctcttgtctccagagctgtgctcggcagctcttattgcttgcctccccactg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tccctcctctcttgtctccagagctgtgcttggcagctcttattgcttgcctccccactg 260
Query: 61 tctgcctgtttctctgcaaatctcatctcttaccttagttcaggtctttatctcaatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgcctgtttctctgcaaatctcatctcttaccttagttcaggtctttatctcaatact 320
Query: 121 agattgggtacaaacctcctcattggttaatctgcctagataaatgttacctattggtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattgggtacaaacctcctcattggttaatctgcctagataaatgttacctattggtgt 380
Query: 181 catttttaatagaatattttttgtcctcaacagtattttcaagccttatagactgccgtg 240
|||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttttaatagaataaattttggcctcaacagtattttcaagccttatagactgccgtg 440
Query: 241 ttccaaccacacaattctgtgttccagtttcatgcacaccgctcacctgcagaagctccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccaaccacacaattctgtgttccagtttcatgcacaccgctcacctgcagaagctccc 500
Query: 301 agtggctcccaattgtttatagggctgactgtagcatcagcaatagaaactgtgtttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtggctcccaattgtttatagggctgactgtagcatcagcaatagaaactgtgtttgga 560
Query: 361 ttgtctgtggatactctgctcctaaaggcctatctattatagtagatggtacctaatagg 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtctgtggatactctactcctaaaggcctatctattatagtagatggtacctaatagg 620
Query: 421 cacccaaagactattaagttgaaatgg 447
|||||||||||||||||||||||||||
Sbjct: 621 cacccaaagactattaagttgaaatgg 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_a11.g1 MSMg01no199_a11.g1 CHROMAT_FILE:
MSMg01no199_a11.g1 PHD_FILE: MSMg01no199_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:27 2005
(276 letters)
>mm_chr5_97143541_97144215
Length = 675
Score = 480 bits (248), Expect = e-140
Identities = 269/278 (96%), Gaps = 5/278 (1%)
Strand = Plus / Minus
Query: 1 aggctttctcctccggtgctgggggctgaattccagacttcgtggatgctaggcacatac 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 aggctttctcctccggtgctgggggctgaattccagacttcatggatgctaggcacatac 501
Query: 61 cgttccacttacctacactcccagctgaagggaatagttaccataggacattacactgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cgttccacttacctacactcccagctgaagggaatagttaccataggacattacactgtg 441
Query: 121 ctctgcagtcacggtaatgccaaagaccagaggggtacaggttgctccagaagtgttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctctgcagtcacggtaatgccaaagaccagaggggtacaggttgctccagaagtgttgac 381
Query: 181 tttctggttatggagataagagcgcttatatgatattataattttgtgtgtgtgtggatc 240
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 380 tttctggttatggagataaaagcgcttatatgatattataattttgtgcgtgtgtggatc 321
Query: 241 tgtttg--atcagacccagggttttattcatattaagg 276
|| | |||||||||||||||||| |||||||||||
Sbjct: 320 tg---gcgatcagacccagggttttactcatattaagg 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 675
Length adjustment: 9
Effective length of query: 267
Effective length of database: 666
Effective search space: 177822
Effective search space used: 177822
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
