ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTAATCTTTCTAAGACTTTTATCATGAATGGCTGTTGTTTTTTC
TGCATCTAACGAGATGATCATGTGGTTTTTGTCTTTGAATTTGCTTATAT
AATGGATTACATTGATGGATTTTCGTATATTAAACCATCCCTGCATCCCT
GGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTAATGTGTTCTTG
GATTCGGTTAGCGAGAATTTTATTGAAGATTTTTGCATCGATATTCATAA
GTGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGGTCTTTCTGTGGTTTA
GGTATCAGAGTAATATTTTTTTCACCCCCCCACCCTGGGTAGAGTACCTT
CTACTTCTATTTTGTGAAATACCTTGTGCAGAAATGGAATTAGATCTTCT
TTGAAGGTCTGATAGAACTCTGCACTAAACCCGTCTGGTCCTGGGCTTTT
TTTGGCTGGGAGACTATTAATAACTGCTTCTATTTCTTTAGGTGATATGG
GACTGTTTAGATGGTCAACTTGATCCTGATTCAACTTTGGTACCTGGTAT
CTGTCCAGAAATTTGTCCATTTTGTCCAGGTTTTCCAGTTTTGTTGAGTA
TAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTCTTCAGGATCTG
TTGTTATGTCTCCCTTTTCATTTCT

NCGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTACTGCGTTGTCTGCCACTAAGCC
TTTCTCACCTATTTCCTAGAAACCTGCACAGGCAGACATATATATTCACA
TAGGCCTATAATAGACAAAACTATTCTGAGACTGTTGCTTATTACAAGCA
GTAGGAATTATTTAAGTAACCCAAACCTTAATGACTTTAAACAAACACTT
ATTAATGCTGATGGGTAAATGAGGGAATTGAATGATTGATTTGAAATATT
GGCCAGGTACATTTATATTATTTTCTCAATTTTGTGTTAGGCACTTTGTT
GTGGCTGGGCTCACTGATATCTGGGGGTGAGAATATATGTGGCTAAACGA
GTATGTTGGAAGATGCAGCTGTGATCCATATATCTCATTGTTTAGCAGAA
AATTTGGAAAAAATGCTACACAGCAAGTCAAAATAACAGGAGTGCTGGAT
TCAAAATATAAATGCCTGTTCTATATCTTTACAAACATCTGTTTATAAAG
AAGCCCACAAATAGCATTTTGATTGATTTGCAAATAATTCTTAAGCATAT
GTATGTAGAAATATTATTGATCTTGTCAATTCTGTGACATGATTTTATTG
ACATGGCCTATCACAAGGCCTTATTATTCTTGCTTATTGCCTTGGAATCC
TACCTTGCCAGGCTAATAAAACTTCCTGCTGACAGGACCCTGATAAAGCT
GCC

Query= MSMg01no199_a23.g1 MSMg01no199_a23.g1 CHROMAT_FILE:
MSMg01no199_a23.g1 PHD_FILE: MSMg01no199_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:29 2005
         (579 letters)



>mm_chr5_78654576_78655554
          Length = 979

 Score = 1093 bits (565), Expect = 0.0
 Identities = 574/577 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctactgcgttgtctgccactaagcctttctcacctatttcctagaaacctgcacaggca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tctactgcgttgtctgccactaagcctttctcacctatttcctagaaacctgcacaggca 718

                                                                       
Query: 61  gacatatatattcacataggcctataatagacaaaactattctgagactgttgcttatta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gacatatatattcacataggcctataatagacaaaactattctgagactgttgcttatta 658

                                                                       
Query: 121 caagcagtaggaattatttaagtaacccaaaccttaatgactttaaacaaacacttatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 caagcagtaggaattatttaagtaacccaaaccttaatgactttaaacaaacacttatta 598

                                                                       
Query: 181 atgctgatgggtaaatgagggaattgaatgattgatttgaaatattggccaggtacattt 240
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atactgatgggtaaatgagggaattgaatgattgatttgaaatattggccaggtacattt 538

                                                                       
Query: 241 atattattttctcaattttgtgttaggcactttgttgtggctgggctcactgatatctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atattattttctcaattttgtgttaggcactttgttgtggctgggctcactgatatctgg 478

                                                                       
Query: 301 gggtgagaatatatgtggctaaacgagtatgttggaagatgcagctgtgatccatatatc 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 477 gggtgagaatatatgtggctaaacgagtatgttggaagatgtagctgtgatccatatatc 418

                                                                       
Query: 361 tcattgtttagcagaaaatttggaaaaaatgctacacagcaagtcaaaataacaggagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcattgtttagcagaaaatttggaaaaaatgctacacagcaagtcaaaataacaggagtg 358

                                                                       
Query: 421 ctggattcaaaatataaatgcctgttctatatctttacaaacatctgtttataaagaagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ctggattcaaaatataaatgcctgttctatatctttacaaacatctgtttataaagaagc 298

                                                                       
Query: 481 ccacaaatagcattttgattgatttgcaaataattcttaagcatatgtatgtagaaatat 540
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 297 ccacaaatagcattttgattgatttgtaaataattcttaagcatatgtatgtagaaatat 238

                                                
Query: 541 tattgatcttgtcaattctgtgacatgattttattga 577
           |||||||||||||||||||||||||||||||||||||
Sbjct: 237 tattgatcttgtcaattctgtgacatgattttattga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)