Query= MSMg01no202_o07.b1 MSMg01no202_o07.b1 CHROMAT_FILE:
MSMg01no202_o07.b1 PHD_FILE: MSMg01no202_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:52 2005
(302 letters)
>mm_chr5_72827014_72827712
Length = 699
Score = 499 bits (258), Expect = e-146
Identities = 290/302 (96%), Gaps = 3/302 (0%)
Strand = Plus / Plus
Query: 1 ctaataagtaaaaacagcacttgatgacagaaaccagtctaacaaatgcatacgcccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ctaataagtaaaaacagcacttgatgacagaaaccagtctaacaaatgcatacgctggtg 260
Query: 61 ctcggatctgcaatccagcctaggagcatgtttcccagtcacgttggaacctctaagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcggatctgcaatccagcctaggagcatgtttcccagtcacgttggaacctctaagctt 320
Query: 121 gctttccttgatggtcagttctgatagacaccgtctcctccatgactcacacaattctac 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 gctttccttgatggtcagttctgatagacaccgtctcctccatgacccacacaattctac 380
Query: 181 caccccaagaacttgtctgcttactctaacataaatcaaaatgttgacatgggttcatga 240
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |
Sbjct: 381 caccccaagaacttgtctgcttgctcttacataaatcaaaatgttgacatgggttcacaa 440
Query: 241 aatggaattttgagaggcttttcttcttcattttattctatactcttgaattgttttaag 300
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 441 aatggaattttgagaggcttttcttc---attttattctatactcttgaattggtttaag 497
Query: 301 aa 302
||
Sbjct: 498 aa 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 699
Length adjustment: 9
Effective length of query: 293
Effective length of database: 690
Effective search space: 202170
Effective search space used: 202170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no202_o07.g1 MSMg01no202_o07.g1 CHROMAT_FILE:
MSMg01no202_o07.g1 PHD_FILE: MSMg01no202_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:52 2005
(110 letters)
>mm_chr5_72889517_72890026
Length = 510
Score = 174 bits (90), Expect = 1e-48
Identities = 105/110 (95%)
Strand = Plus / Minus
Query: 1 atcctgcagtaggaatgcagggaagagagatttggctgaagatcctatttcagcctgcct 60
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 310 atcctgcaacaggaatgcagggaagagagatttggctgaagatcctacgtcagcctgcct 251
Query: 61 gacctttacccagtaagcacggcgacagagagcactctgccctagactgt 110
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 250 gacctttacccagtaagcacggggacagagagcactctgccctagactgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 510
Length adjustment: 8
Effective length of query: 102
Effective length of database: 502
Effective search space: 51204
Effective search space used: 51204
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
