CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCAATTTCTAACGTTGCCAACTGTCCGAAGGAGCTCCAACACAT
GACCCAGAGTGAATTAATTGTTCTGACAGTTCATTTGTAGTTATATCTAG
CTAGCTAGTTATGTAGATAGGTAGTCAGGCAGGCAGACAGGTAAGTAATT
AGTGGAAGGTCGCATGCTTGTGCTGTCATCCTCCTGTAGAGGTCAGACTG
CAAGAGTCAGTTCTCTCCTTCAACTGGATCACTGGAAACAAACTAAAGTC
ACCTGCTTTGGTAACAAAGCACCTTTACTTGCCAGCTCAATGTCACACAA
GGTGAATTCATATTAAAGAGTCAATCAAATGAGCAAAACATAGAGAAATA
ATTCAATGGAAAATGCTGTCTTTAAACCTAAAGTTTATGGGTGGCCTCGG
GGCCTCACAATTATAAGAAAGTTAAACAACCAAGGTGAGTCCTTAAGAAA
TTTAAGTGTTGTGCAGAGGTTTGAAACAGAATACCATAGTAACATTTAAT
AATTCCACATAAGATATAAGACAGAGATTCAAAGATTGCAAGTCACTAAG
GAAAGAGCACGGGCATTCGAGATGGACAGCACATGTTTCCTTAGGTGAGT
TTTATGACAAAATCTAATGTGTTTAAACCTTTAGTCTCCAGTGGATTTTA
CAAAAATGGAGAAAGTAATAATACCTAGTCAAAAATGACAGCCTGAGAG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGAAGATAGTCTCCAGAGAACCA
AATAACCCTATTTAAAAATGGGCACAGAGATAAACAAAGAATTTTCAACT
GAGGAATATTGAATGGCTGAGAAGCACCTAAAGAAATGTTCAAGATCCAT
AGTCATCAGGGAAATACAAATCAGAACACCCCTGATTTTCCACCTCACAC
CAGTCAGAATAGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGTGA
GGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGAATGCAAGCT
TGTACAACCACTCTGGATATCAATTTGCCGCCCCCCTCAGAAAATTGGAC
ATAGTATTACCTATGGACCCAACTATTCAACTCCTGGGCATATACCTAGA
AGATGTTCCAACATGTAATAAAGACACATGCTCCACTATGTTCATATCAG
CCTTATTTATAATAGCCAGAAGCAGGAAAGAACCCAGATGTCCTTCACCA
GAGGAATGCATACTGAAAATGTGGTACATTTACACAATGGAGTACTACTC
AGCTAATAAAAATGATGAATTCATAAAATTCTTAGGCAAATGAATAGAGC
TAGAAAATACCATCCTGAGTGATATAACCCAATCGCATAAGAAAACGGAT
TGTATGCACTCAATGATAAGTGTATACTAGTCCCCAAACTCCAAATATCA
GGATA

Query= MSMg01no203_c19.b1 MSMg01no203_c19.b1 CHROMAT_FILE:
MSMg01no203_c19.b1 PHD_FILE: MSMg01no203_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:15 2005
         (704 letters)



>mm_chr5_71625643_71626747
          Length = 1105

 Score = 1232 bits (637), Expect = 0.0
 Identities = 685/701 (97%), Gaps = 2/701 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgcaatttctaacgttgccaactgtccgaaggagctccaacacatgacccagag 64
           ||||||||| ||||| || ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 206 gaattctgctatttcaaatgttgccaactgtc-gaaggagctccaacacatgacccagag 264

                                                                       
Query: 65  tgaattaattgttctgacagttcatttgtagttatatctagctagctagttatgtagata 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgaattaattgttctgacagttcatttgtagttatatctagctagctagttatgtagata 324

                                                                       
Query: 125 ggtagtcaggcaggcagacaggtaagtaattagtggaaggtcgcatgcttgtgctgtcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtagtcaggcaggcagacaggtaagtaattagtggaaggtcgcatgcttgtgctgtcat 384

                                                                       
Query: 185 cctcctgtagaggtcagactgcaagagtcagttctctccttcaactggatcactggaaac 244
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 385 cctcctgtagaggtcagactgcaagagtcagttctctccttctactggatcactggaaac 444

                                                                       
Query: 245 aaactaaagtcacctgctttggtaacaaagcacctttacttgccagctcaatgtcacaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaactaaagtcacctgctttggtaacaaagcacctttacttgccagctcaatgtcacaca 504

                                                                       
Query: 305 aggtgaattcatattaaagagtcaatcaaatgagcaaaacatagagaaataattcaatgg 364
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 505 aggtgaattcatattaaagagtcaatcaaatgagcaaaacatggagaaataattcaatgg 564

                                                                       
Query: 365 aaaatgctgtctttaaacctaaagtttatgggtggcctcggggcctcacaattataagaa 424
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaatgctgcctttaaacctaaagtttatgggtggcctcggggcctcacaattataagaa 624

                                                                       
Query: 425 agttaaacaaccaaggtgagtcctt-aagaaatttaagtgttgtgcagaggtttgaaaca 483
           ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||
Sbjct: 625 agttaaacaaccaaggtgagtccttcaagaaatgtaagtgttgtgcagaggttcgaaaca 684

                                                                       
Query: 484 gaataccatagtaacatttaataattccacataagatataagacagagattcaaagattg 543
           |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 gaataccatagtgacatttaataattccacgtaagatataagacagagattcaaagattg 744

                                                                       
Query: 544 caagtcactaaggaaagagcacgggcattcgagatggacagcacatgtttccttaggtga 603
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 745 caagtcactaaggaaagagcacgggcattcaagatggacagcacatgtttccttaggtga 804

                                                                       
Query: 604 gttttatgacaaaatctaatgtgtttaaacctttagtctccagtggattttacaaaaatg 663
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||
Sbjct: 805 gttttatgacaaaatctaatgtgtttaaacctttagtctctagtggattttacatacatg 864

                                                    
Query: 664 gagaaagtaataatacctagtcaaaaatgacagcctgagag 704
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gagaaagtaataatacctagtcaaaaatgacagcctgagag 905


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1105
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1095
Effective search space:   759930
Effective search space used:   759930
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)