TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACGAGGATCCGCG
GAATTCACTGAGTAGTATTCCATTGTGTAAATGTATCACATTTTCTGTAT
CCATTCCTCTGTTGAGAGACATCTGAGTTCTTTCTACCTTCTGGCTATTA
TAAATAAGGCTGTTATGAAAATAGTGGAGCATGTGTCTTTATTACATGTT
GGCACATCTTGCGCGCGCTGGACTCGACCAGCAAGAACGACGCTGCAACA
GGATCCTTCTGCACACTTTTATTGGGAGAGCTAGATTGCAGAGGCGAAAA
GACCCTGAGCCTAGAACTGGTGCTGCTTATATAGGCCTAGGAGAGGCGAG
TCTCACACCCGGATTGGTTATGCACTACACCTCATTTGCATGTTCCTCAT
CTGATTGGCTACTCTCTCTCCGCACCTCACAGAGCCTCATTATCATACCT
CATTTGCATGTCTCACATCTGATTGGTTATACTCTCAAAGCCTCATTATC
ATGCCCGGGCCAGGCAGTGTCTTTGCAAAAAACTTTACTGCATATGTACA
CATTGGTTGTTTGTCCAAACTTATGCGTGGTGGCCAGCAGTAGTCAGTGC
CACTCTGCAATGGCACATGTGGCTTCCCACATCTTCTGGATATATGCCCT
GGAGTGTCAAAGCTGGGTCCTTTGGTAGTACTATGCCCAGTTTTCTTGAG
AACTTCCGACTGATTTCCCGAGTGATCGTATCAATTTGCAATTTCTTTTA
CACCGGTGGAAT

CCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGCATATAAGACATTTCTAGCCACA
TCAGCAAAAAGTTGAGGATGTGTTTCTGCCTCTGTGGAACACAGCTCTAG
AATGTTTATATAAACTCCTTATCTTTTTCTCTTTCTCTCTCTCTCATATA
TATACAAATATGTATATCTACATACACACACACATATATATATATATATA
TATATATATACATACACATATATGTATATATACACACACACATATACATA
TTTTTCTAACATACCTACTTAGCTGCGAAGTGGCATAGACTTAACATTTA
AGAAGAACAATTACATTATTAGTGGTGACTTTCTAGATTTAAGGCATTTG
CTTGACTTCCATATGACTGACGAGTTTTATGGGTAGATGCTTTAGACCAA
GGTTGGTGAGTGTTACAGGAAAATATCCTCACAGTCACTAAGAAGACTCG
TTGCATTGTTATACAACCTGCACACACAAGACACACATGCAAATCAATCC
AAAGAACACTAGAGTGTTGAAGCTGAGCAGATGATGGTGCACTGTTTTAA
TTCCAGCACTCAAATGTATCTTTAAGCTTAGCCTGAGCAAGTTTCAAGAC
AGCCAAGGTTACCCCAAAACTGGTTTACCCTTCACCTTGATGATACTTTC
TTATATACAATTTGTGTATACCTTTACGAGCTTGCTTAATTGAATTCTGT
TTTAGGTTGTCTCCTGTAGAG

Query= MSMg01no203_l05.g1 MSMg01no203_l05.g1 CHROMAT_FILE:
MSMg01no203_l05.g1 PHD_FILE: MSMg01no203_l05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:24:56 2005
         (451 letters)



>mm_chr5_71425060_71425910
          Length = 851

 Score =  542 bits (280), Expect = e-158
 Identities = 412/482 (85%), Gaps = 52/482 (10%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcatataagacatttctagccacatcagcaaaaagttgaggatgtgtttctgcctctgt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 812 tgcatataagacatttctagccacatcagcaaaaagttgaggatgtgtttctggttctgt 753

                                                                       
Query: 61  ggaacacagctctagaatgtttatataaactccttatctttttctctt--tctctctctc 118
           |||||| ||||||||||||||||||||||||| |||||||||||||||  ||||||||||
Sbjct: 752 ggaacatagctctagaatgtttatataaactctttatctttttctctttctctctctctc 693

                                                                       
Query: 119 tcatatatatacaaatatgtatat-ctacatacacacacacatatatatatatat----- 172
           ||||||||||||| ||||||| || | ||  ||||||||||||||||||||| ||     
Sbjct: 692 tcatatatatacatatatgta-atgc-ac--acacacacacatatatatatacatacaca 637

                                                                       
Query: 173 -atatatatatatacat-----acacatatatg----------tatatatacacacacac 216
            |||| | ||| || ||          ||| ||          |||||||| | ||| ||
Sbjct: 636 catatgtgtatgtatatgtgtg-----tatgtgtgtgtgtgtatatatatatatacaaac 582

                                                                       
Query: 217 atatacatatttttct-----aac--atacctacttagctgcgaagtggcatagacttaa 269
           ||||||||||||||||     |||  |||| |||||||||||||||||||||||||||||
Sbjct: 581 atatacatatttttctactcaaacatatacttacttagctgcgaagtggcatagacttaa 522

                                                                       
Query: 270 catttaagaagaacaattacattattagtggtgactttctagatttaaggcatttgcttg 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 catttaagaagaacaattacattattagtggtgactttctagatttaaggcatttgcttg 462

                                                                       
Query: 330 acttccatatgactgacgagttttatgggtagatgctttagaccaaggttggtgagtgtt 389
           |||| ||||||||||| |||||||||       ||     ||||||||||||||||||||
Sbjct: 461 actttcatatgactgatgagttttat-------tg-----gaccaaggttggtgagtgtt 414

                                                                       
Query: 390 acaggaaaatatcctcacagtcactaagaagactcgttgcattgttatacaacctgcaca 449
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 413 acaggaaaatatcctcacagtcactaagaagactcattgcattgttatacaacctgcaca 354

             
Query: 450 ca 451
           ||
Sbjct: 353 ca 352


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space:   370881
Effective search space used:   370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)