Query= MSMg01no204_c23.b1 MSMg01no204_c23.b1 CHROMAT_FILE:
MSMg01no204_c23.b1 PHD_FILE: MSMg01no204_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:38 2005
(449 letters)
>mm_chr5_134323260_134324107
Length = 848
Score = 832 bits (430), Expect = 0.0
Identities = 442/446 (99%), Gaps = 1/446 (0%)
Strand = Plus / Minus
Query: 1 aagttgtcatccatgtaggatgagatgttttgtgatgaagttcccttgggccgccctgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 824 aagttgtcatccatgtaggatgagatgttttgtgatgaagttcccttggggtggcctgtg 765
Query: 61 aaaactcatttgtgctccaaattggacttggatggactcctacttggtttatttttggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aaaactcatttgtgctccaaattggacttggatggactcctacttggtttatttttggtg 705
Query: 121 atatacaagggctagatagatatttgtttaagtcttcctagggaaagagtttcatgacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atatacaagggctagatagatatttgtttaagtcttcctagggaaagagtttcatgacaa 645
Query: 181 ctagaaaagatattcctcttccaggctaagattagtatcttcaactgtgccaccgaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ctagaaaagatattcctcttccaggctaagattagtatcttcaactgtgccaccgaccct 585
Query: 241 gtttcccccatttacctggtgacatcactcatgggaactctctcctattctttctgaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtttcccccatttacctggtgacatcactcatgggaactctctcctattctttctgaact 525
Query: 301 tcccaatatcagttgaccatgccaatctctcataaaattctgaatattttcttgactcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcccaatatcagttgaccatgccaatctctcataaaattctgaatattttcttgactcca 465
Query: 361 ttttaccttcctattctgcacttctttctccttataatctttttttttttttaacttgat 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 464 ttttaccttcctattctgcacttctttctccttataatc-ttttttttttttaacttgat 406
Query: 421 tgggtggtgatgagtttgagccatgg 446
||||||||||||||||||||||||||
Sbjct: 405 tgggtggtgatgagtttgagccatgg 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 848
Length adjustment: 10
Effective length of query: 439
Effective length of database: 838
Effective search space: 367882
Effective search space used: 367882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no204_c23.g1 MSMg01no204_c23.g1 CHROMAT_FILE:
MSMg01no204_c23.g1 PHD_FILE: MSMg01no204_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:38 2005
(294 letters)
>mm_chr5_134271475_134272168
Length = 694
Score = 569 bits (294), Expect = e-167
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 cctgtggttgtttcctattaggtccgtgatgcactactgcccccgtgtgtaccaagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtggttgtttcctattaggtccgtgatgcactactgcccccgtgtgtaccaagcttg 260
Query: 61 gctagcaaggatctggcacccacactgacattaggatattgaattttattttattttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctagcaaggatctggcacccacactgacattaggatattgaattttattttattttatt 320
Query: 121 attttttgagcaagaacacttaagaagaagaaaaaatagactctcaaaaatcctctttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttttgagcaagaacacttaagaagaagaaaaaatagactctcaaaaatcctctttat 380
Query: 181 ccaagatcaaatagaataaaacccaattaagtcagagcagctgttggtgtttaaccaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaagatcaaatagaataaaacccaattaagtcagagcagctgttggtgtttaaccaact 440
Query: 241 caagcggcacatcttttccttccgtcggtgatgtgtattggacatccggctcca 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagcggcacatcttttccttccgtcggtgatgtgtattggacatccggctcca 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
