Query= MSMg01no204_g08.b1 MSMg01no204_g08.b1 CHROMAT_FILE:
MSMg01no204_g08.b1 PHD_FILE: MSMg01no204_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:55 2005
(195 letters)
>mm_chr5_19083808_19084402
Length = 595
Score = 329 bits (170), Expect = 8e-95
Identities = 185/190 (97%), Gaps = 2/190 (1%)
Strand = Plus / Plus
Query: 5 gaattctgtttagccctgtttcccatttttaataaggttagttggttctctggagtctaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtttagctctgtttcccatttttaataaggttagttggttctctggagtctaa 264
Query: 65 gttcttgaaggctgttttattatagattcataagtgatagctcaaaaacaataaagggat 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 gttcttgaagggtgttttattatagattcataagtgatagctcaaaaacaataaagg-at 323
Query: 125 aactcctgtgtagcaggaatgagtgtcctaaaaggtgatccca-caaaacatattctgga 183
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 324 aactcctgtgtagcaggaatgagtgtcccaaaaggtgatcccaacaaaacatattctgga 383
Query: 184 ggattttttt 193
||||||||||
Sbjct: 384 ggattttttt 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no204_g08.g1 MSMg01no204_g08.g1 CHROMAT_FILE:
MSMg01no204_g08.g1 PHD_FILE: MSMg01no204_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:55 2005
(282 letters)
>mm_chr5_19191908_19192589
Length = 682
Score = 522 bits (270), Expect = e-153
Identities = 279/282 (98%)
Strand = Plus / Minus
Query: 1 tatgatttctacagctatgcaagccccttatcatcattgccagccaattagattagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 482 tatgatttctacagctatgcaagccccttatcatcattgccagccaattagatgagagca 423
Query: 61 actgcatctctaccaaactgggaaaggataaaagtacacagattggatttgtgttttgct 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 422 actgcatctctaccaaactgggaaaggataaaagtgcacagattggatttgtgttttgct 363
Query: 121 tttgtcttgtctttggaggaagagttatcactaacgtgtggagcagcactcatagctacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tttgtcttgtctttggaggaagagttatcactaacgtgtggagcagcactcatagctacc 303
Query: 181 ccatcccccatggaacttgtgcagatatttatgtgtgacttatttatgtacaaagagact 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 302 ccatcccccatggaacttgtgcagatatttatatgtgacttatttatgtacaaagagact 243
Query: 241 tctctgaaagcttgtctttatgtaggtaaaatgaatcggaac 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tctctgaaagcttgtctttatgtaggtaaaatgaatcggaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
