TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAATTTCACCATTCTGACTGAGGCTAAGTGGAATCTTTGAAGAGT
TTCAATTTGCATTTTATATTGTTAAAGGTATTAAACATATTCTTAGATAT
TTCATAAAAAGTTTTATTTCTTCTTTTAAAATTATGTGCAGTGTCATAAC
TAATTTTAAATAAATTTCTTTATAAATGTTTTTATTTTAATAAAACTAAT
ACAATGTCAATTGAAACCCCATGACCCAAGCTTTAGAAAATACAAACAGT
ATCAAAAAAAAACTATGTTGTGCTGCAAAGACTTCTGCTTCATTTACTTT
ATTTACTCCTAATCACCATATGAAATTGTCTCTGGGATCACCTGACAAAA
CTTTCTTTTACCCCCACCACGCTTTCTCTCAGCAAAGAAGCTATGTTTGG
AGTGAGATTTGCTCTTGCTGTGTCTGTCATTTGGCTCCATCCTTGATTTT
CTTCTTCCGGTCCAGACCTTCAGTTTTAAAAGCAGCTTCAAACTATCATA
AATTTAATTACAATAAATTCCCACAATTCAGGTCTCTGATAAACTTAAAT
CTCCCACTGAAAATCACCAATGAGTTGCGCAGCAATCACATGTTAGAGAT
TCATGATAATCATAAGGTCGTATGAAAGCTTGCACTGCTTGATTTTTTTT
ACGTCCGAAACCTGAATATGCTCAGTTCTGTATTTTA

TTGGTTTTGNTCCGTCTCTTGTAGGTCCCTTTTCTCCCCTCTTCCTTTTT
CTAGTATGATAGTGGTAGGCCGGGNGGNCGCCTGTTTCGGAGCAGNAGGN
GANNNANAGAATTTTCAAAAAAAAGAGGGGNNNGAGGAAANNGAAGGGNA
GAGAAGNANNNGAAAATTTTTCACCAACAAGAAGGGGGAGGGAAAGGNAA
ANNAAAANAANNNGGAGAAGNGAGNNNNAANNAGGNAGAAGGGNNAAGAG
NAAAAAGNGAGGGGANAGNAGAAGGNGGNGAGGANGNGGAGAAAGAGGAN
AATTTTTTTTTTGTTGGTGGGAGTGAAGGATTGTAAAATTAATCTGGAAA
TAAGTATGGNGGNNGATGTTTTATTGTTTATANAGGAGGANNGGAGGAGG
AAGAAAAATTTTTTTTTTTTTCCCCCCCCCCAAGATGGCGTTTATGGTTA
TAAGGATACATGCTCCACCCCCAAAAAAAAAAAAAAAAATGTGGGCTTGT
CCTGGGGTGTTTATAATTTAAATGATTCTCTACAAAGGTTTGCTTTACTT
TTCATGTAGCTTTTCCTTACTTTTGAGTTTTACTCTGTTTATTTCAAGAT
TTGACCTCATTGCTGTTTCAGTTTCAACGTTTTTCATATGCGTTTTCCTT
TTCATCGTCGTGAGTTTTTTTTTTTGCGCACGAATTTTCGGTTTCGCTGG
CCTTTCCTTTATATTCGCGCTTTTTTATTTTCTTTTTTAGGGATTTCCGC
GAATTTCCTTTTTGTTTTTTGACTTTTATTTTTGCAATTGTCAGTTTAAT
TTTTATACCTG

Query= MSMg01no205_p08.b1 MSMg01no205_p08.b1 CHROMAT_FILE:
MSMg01no205_p08.b1 PHD_FILE: MSMg01no205_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:58 2005
         (500 letters)



>mm_chr5_80485930_80486827
          Length = 898

 Score =  849 bits (439), Expect = 0.0
 Identities = 482/497 (96%), Gaps = 3/497 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcaatttcac-cattctgactgaggctaagtggaatctttgaagagtttcaatt 63
           ||||| |||||||||| ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 896 gaattttcaatttcacacattctgactgaggctaagtggaatcttttaacagtttcaatt 837

                                                                       
Query: 64  tgcattttatattgttaaaggtattaaacatattcttagatatttcataaaaagttttat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 tgcattttatattgttaaaggtattaaacatattcttagatatttcataaaaagttttat 777

                                                                       
Query: 124 ttcttcttttaaaattatgtgcagtgtcataactaattttaaataaatttctttataaat 183
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 776 ttcttcttttaaaattatgtgcagtgtcataactgattttaaataaatttctttataaat 717

                                                                       
Query: 184 gtttttattttaataaaactaatacaatgtcaattgaaaccccatgacccaagctttaga 243
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 716 gtttttattttaataaaactaatacaatgtcaatttaaaccccatgacccaagctttaga 657

                                                                       
Query: 244 aaatacaaacagtatcaaaaaaaaactatgttgtgctgcaaagacttctgcttcatttac 303
           || ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||
Sbjct: 656 aactacaaacagtatcaaaaaaa--ctatgttgtgctgcaaagacttctgcttcatttac 599

                                                                       
Query: 304 tttatttactcctaatcaccatatgaaattgtctctgggatcacctgacaaaactttctt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 598 tttatttactcctaatcaccatatgaaattgtctctgggatcacctgacaagactttctt 539

                                                                       
Query: 364 ttacccccaccacgctttctctcagcaaagaagctatgtttggagtgagatttgctcttg 423
           |||| |  || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ttactcttacaatgctttctctcagcaaagaagctatgtttggagtgagatttgctcttg 479

                                                                       
Query: 424 ctgtgtctgtcatttggctccatccttgattttcttcttccggtccagaccttcagtttt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ctgtgtctgtcatttggctccatccttgattttcttcttccggtccagaccttcagtttt 419

                            
Query: 484 aaaagcagcttcaaact 500
           |||||||||||||||||
Sbjct: 418 aaaagcagcttcaaact 402


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 898
Length adjustment: 10
Effective length of query: 490
Effective length of database: 888
Effective search space:   435120
Effective search space used:   435120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)