Query= MSMg01no206_n10.b1 MSMg01no206_n10.b1 CHROMAT_FILE:
MSMg01no206_n10.b1 PHD_FILE: MSMg01no206_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:08 2005
(662 letters)
>mm_chr5_60447022_60448084
Length = 1063
Score = 1218 bits (630), Expect = 0.0
Identities = 652/660 (98%), Gaps = 3/660 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatgaattgtggttattctcacttattcattcttttatctccttcccagacctc 64
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaatttaatgaattgtggttattctcacttattcattcttttatctccttcccatacctc 264
Query: 65 tcatcaattactccattctatggagtactttcccacattaatgcatgttcctaataaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcatcaattactccattctatggagtactttcccacattaatgcatgttcctaataaata 324
Query: 125 aatggggcatgactcttttgagattgtctgtttttaaatccatttagaacacataaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatggggcatgactcttttgagattgtctgtttttaaatccatttagaacacataaaaaa 384
Query: 185 atcaattcacttttatagccatttttaaaaacaaaatttttttatttttatatttaaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcaattcacttttatagccatttttaaaaacaaaatttttttatttttatatttaaaaa 444
Query: 245 caaaaagccaagatttgatttagaacaccaaaaaaccagttaaattccatgaacatttgg 304
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 caaaaagccaagatttgatttagaacaccaaaaa-ccagttaaattccatgaacatttgg 503
Query: 305 aatttccactgtcagcacaatttttcttcttaaacagtctataaattatgttgaatactt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aatttccactgtcagcacaatttttcttcttaaacagtctataaattatgttgaatactt 563
Query: 365 ttctaaacatgctataagctgtatacattatttaattcattctaaaaaa--tacctctac 422
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 564 ttctaaacatgctataagctgtatacattatttaattcattctaaaaaaaatacctctac 623
Query: 423 taaataaaacttatcaaagtcaacatataaaaatgagcagtaactgaagaaatgagcagc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taaataaaacttatcaaagtcaacatataaaaatgagcagtaactgaagaaatgagcagc 683
Query: 483 cagacattgcccaacctggagatctatcccatatacaatcaccatactcagacactattg 542
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagacactgcccaacctggggatctatcccatatacaatcaccatactcagacactattg 743
Query: 543 tggatgccaacaagagcttgctgacaggaatctgatgtagctttctcccgagaggctctg 602
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 744 tggatgccaacaagagcttgctgacaggaatctgatgtagctgtctcccgagaggctctg 803
Query: 603 ccagtgccctacaaatacagaagtggatgctcacagccatccattggattgaacacaggg 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ccagtgccctacaaatacagaagtggatgctcacagccatccattggattgaacacaggg 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_n10.g1 MSMg01no206_n10.g1 CHROMAT_FILE:
MSMg01no206_n10.g1 PHD_FILE: MSMg01no206_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:08 2005
(599 letters)
>mm_chr5_60490841_60491839
Length = 999
Score = 609 bits (315), Expect = e-178
Identities = 324/327 (99%)
Strand = Plus / Minus
Query: 1 ataagagaggactgaactgaatatcactcatctggggtaagattaaaattcaatatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ataagagaggactgaactgaatatcactcatctggggtaagattaaaattcaatatttaa 467
Query: 61 gagttggatgtgttataatctcagaactcaggaagctaaaacaggaaaatattcagtctg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 466 gagttggatgtgttataatctcagaattcaggaagctaaaacaggaaaatattcagtctg 407
Query: 121 aggccaacatgggataacttgatggtctcataaaaatatagatcaaaatataaaatatag 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aggccaacatgggataacatgatggtctcataaaaatatagatcaaaatataaaatatag 347
Query: 181 tctcaattaaataataaaaacgtttacaaaactattgtgtcactctattataactggcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tctcaattaaataataaaaacgtttacaaaactattgtgtcactctattataactggcaa 287
Query: 241 cgaacaggatttgttgaattacataaatagaaaataattttaaaatccctagaattttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 286 cgaacaggatttgttgaattacataaatagaaaataattttaaaatccctagatttttgt 227
Query: 301 cttatatttttaaacatattgaaatag 327
|||||||||||||||||||||||||||
Sbjct: 226 cttatatttttaaacatattgaaatag 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
