Query= MSMg01no207_i07.b1 MSMg01no207_i07.b1 CHROMAT_FILE:
MSMg01no207_i07.b1 PHD_FILE: MSMg01no207_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:33 2005
(254 letters)
>mm_chr5_147775005_147775658
Length = 654
Score = 462 bits (239), Expect = e-135
Identities = 250/254 (98%)
Strand = Plus / Plus
Query: 1 caccccacgtccacggagggctctctgcacagaatgttcccaggacatgcattcccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caccccacgtccacggagggctctctgcacagaatgttcccaggacatgcattcccacct 260
Query: 61 cagccccgtcgccaagccctcacctcagcgttacctgggccggggtaggcgagcaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccccgtcgccaagccctcacctcagcgttacctgggccggggtaggcgagcaggaag 320
Query: 121 aactagcaggtccgtacctggactccgccggaggatcgcgtcggcttccgtagcaggcgg 180
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 321 aactagcaggtccgtacctggactccgccggagcaccgcgtcggcttccgtagcaggcgg 380
Query: 181 aacttcctgagtcccttanagggagggtgcagctgcggcctgcggattccgctaatggaa 240
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 aacttcctgagtcccttaaagggagggtgcagctgcggcctgcggattccactaatggaa 440
Query: 241 taaagccctccgac 254
||||||||||||||
Sbjct: 441 taaagccctccgac 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no207_i07.g1 MSMg01no207_i07.g1 CHROMAT_FILE:
MSMg01no207_i07.g1 PHD_FILE: MSMg01no207_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:30:33 2005
(291 letters)
>mm_chr5_147862027_147862717
Length = 691
Score = 408 bits (211), Expect = e-118
Identities = 273/297 (91%), Gaps = 11/297 (3%)
Strand = Plus / Minus
Query: 1 aagagtcccattctacccaa-tggttctccaccagccattacagtggttagcttgggggt 59
|||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||
Sbjct: 573 aagagtcccattctacccaaggggttccccaccagctatcacagtggttagcttgggggt 514
Query: 60 tgtgattgccatagtgtggacagaagctgaacagctacat----cccacccccaccccca 115
|||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 513 tgtgattgccatagtgtggacagaagctgaacagctacatcccccccacccccatcccca 454
Query: 116 ccccctgcgttttctcctcagttctgct-gacattcttagaccataatattttgtttctt 174
||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 453 tcccctgcgttttctcctcagttctgctag-cattcttagaccataatgttttgtttctt 395
Query: 175 gagttacctactactcttttgtgagcgctgaccagttacttcctgtgaacaaactaaaat 234
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gagttacctactactctttcgtgagcgctgaccagttacttcctgtgaacaaactaaaaa 335
Query: 235 caaaacaggcaaaactacaaacaaacaaacaaacaaaaaacatctaaaataaccagg 291
|||||||||||||| ||||| ||| ||| | ||||||||| ||||||||||||||
Sbjct: 334 caaaacaggcaaaagtacaaccaaccaa-c---caaaaaacacctaaaataaccagg 282
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
